Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5181g00007 ATGGACAAGAAACCGTACAATTCATCTCAGGACCCTGAAGTGAGAAAAGGGCCTTGGACCATGGAAGAAGATTTGATCTTGATCAACTATATCGCAAATCATGGTGAAGGTGTCTGGAACTCCTTAGCTAAGGCCGCTGGTCTTAAGCGTACCGGCAAGAGTTGTCGGCTCCGGTGGCTAAACTACCTTCGTCCTGATGTTAGAAGAGGGAATATTACACCAGAGGAACAGCTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAACAGGTGGTCAAAGATCGCGAAGCATTTACCGGGAAGAACTGATAACGAGATCAAGAACTATTGGAGGACCAGGATTCAGAAGCACATTAAGCAGGCGGAGAACAGCTGCTCGCAACAGCATCATCAAGCCCAGATGAGCTCGGAGACAGCAGATCATCAGCAAGCCAGCAGCAGCCACGTGTCCAACACCATGTCTGATTCTCAGCCGATGGACACTTACTCTCCATCCTCCTTTAATCAAGCGACTCTCACTGATCAGCCCTTCCCAACCCATCCTTTCCCAACCGTACTCGATCAGTCCTCCATCTGCACCAGTCACGAGACTAACTACTGGAGCATGGAGGATCTCTGGTCTAATATGCAAATACTTAATGGGGATTAA 648 0.4846 MDKKPYNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSCSQQHHQAQMSSETADHQQASSSHVSNTMSDSQPMDTYSPSSFNQATLTDQPFPTHPFPTVLDQSSICTSHETNYWSMEDLWSNMQILNGD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5181g00007 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pral5181g00007 215 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral5181g00007 215 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 11 173 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral5181g00007 215 Gene3D - 73 147 - -
Pral5181g00007 215 MobiDBLite consensus disorder prediction 120 180 - -
Pral5181g00007 215 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral5181g00007 215 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Pral5181g00007 215 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pral5181g00007 215 CDD SANT 73 112 IPR001005 -
Pral5181g00007 215 SMART sant 68 116 IPR001005 -
Pral5181g00007 215 SMART sant 15 65 IPR001005 -
Pral5181g00007 215 FunFam Myb transcription factor 16 68 - -
Pral5181g00007 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Pral5181g00007 215 CDD SANT 18 63 IPR001005 -
Pral5181g00007 215 Gene3D - 16 68 - -
Pral5181g00007 215 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pral5181g00007 215 FunFam Myb-related protein 305 73 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5181g00007 Pral-Chr5181 49629 53093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5181g00007 10 215 MYB Transcription Factor Family AT3G01530 59.420 8.26e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5181g00007 Myb_DNA-binding 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5181g00007 K09422 - gmx:100816972 315.849