Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5179g00009 ATGGAAAGAGGAAGCTTACCTGATATGCTTAGAAATGATAAAGAAGTATCAAAGTTGGATTGGTCAAAGAGGTTTAATATTATCAAGTGGGTAGCACAAGCTTTATCTTACATGTACAATGATTGTAATCCGCCAATTGTTCATAGAGACATATCCAGCAAAAACATTTTACTGTCTTCAAATCTTGAAGCTCATGTCTCAGACTTTGGCAGAACAAGATTCTTAAAGCCTGATTCGTCAATTTGGACAACATTTGCTAGCACATATGGCTATACTGCTCTTGATCAACTACAAAGGGATTCTGGACCCTCGTTTATCATCAACAAATCAGCAAAACTTGAAGAAATTGGCTTTGATTTGGCATCTGGCTCTTCAATGCTTACAAGCAAACCCTCATGCTCAAGCAGCGATGTGCAATCTTGCACAATTGATGGAGATGGAGAGTGCTCATGA 453 0.3841 MERGSLPDMLRNDKEVSKLDWSKRFNIIKWVAQALSYMYNDCNPPIVHRDISSKNILLSSNLEAHVSDFGRTRFLKPDSSIWTTFASTYGYTALDQLQRDSGPSFIINKSAKLEEIGFDLASGSSMLTSKPSCSSSDVQSCTIDGDGECS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5179g00009 150 ProSitePatterns Tyrosine protein kinases specific active-site signature. 46 58 IPR008266 GO:0004672|GO:0006468
Pral5179g00009 150 PANTHER LEUCINE RICH REPEAT KINASE 2 1 94 - -
Pral5179g00009 150 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00009 150 Pfam Protein kinase domain 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00009 150 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
Pral5179g00009 150 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5179g00009 Pral-Chr5179 479359 480226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5179g00009 1 93 Receptor kinase-like Gene Family AT4G08850 62.366 4.96e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5179g00009 Pkinase 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5179g00009 - - gmx:100813275 143.665