Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5179g00006 ATGCAAAGCTTGTCAATCCTCAACCTCTCCTACAATAATTTGGAGGGGCCAATACAAGATAGTGGGATTTTCAGTTCTTCCAATCTAGTAGATTTGAGTCACAACAAAAACTTATGTGGGAGGATCCAAGGTCTGCAACCATGCAATGTGAAGGTTATAAAACCAGTTAGAGGAAGTAACAAAAGGAAAGTTGTGATAATTGTTACTACTTCTATAGCAACTGCACTGATTGTTTTGTTTGTGCTACTTTTGATTTATGTCATTCTAAGTAAGAGAAACTCTAGATCTTTAGAACAAAAAGCTAGAGTCAATAGGGAAAATCCATTCTCAATATGGCACTTCGATGGCAAAATCATGTATGATAACATAATTGAAGCAACTGAGAACTTTCATGAGAAATACTGCATAGGTGCAGGGGCATTTGGAAAAGTCTACAAGTTGACATTGCCAGGGGAGGATAAAGTATTTGCTATAAAAAAGTTTGTATGTGAGGAAAATAGCTTAGACATTAAGAATATAAAAGCTTTTGAGAATGAGATCAAAGCCATGATCAAAACTCGCCACCGAAACATTGTGAAGTTGTATGGATTCTGCTCACAAAGATTGCACACATTTCTAATTTATGAGCACATCAAAAGAGGGAGCTTATTTGATATGCTTAGAAACGATAAAGAAGCATTAGAGTTGGGTTGGTCACAGAGGGCTCATATTATCAAGGGGTTAGCAGAGGCCTTATCATATATACATCATGATTGTAATCCAGCCATTGTTCACAGAGACATATCAAGCAAGAATGTTTTATTATCTTCAAACTTCGAAGTCCATCTCTCAGACTTTGGCACAGCAAGGTTCTTGAAAATCTATTCATCAATTTGGACCACTTTTGCTGGCACATACGGTTATGCTGCTCCAGAGCTTGCGTACACAATGGCAGTGACTGAGAAAGTTGATGTGTATAGCTTTGGTGTTTTGGCCATTGAGTTGCTAATGGGAGAGCATCCTGGTGATTTTATATCATGTATTCAGATGTGTGGGAATGGCCATATCATCTTGGAAGATATTTTGGACCCTCGTTTATCATCAATGAAGCACCAAAACTCTAACAAATTGGCTTTGATTTGGCAAATAGCTCTTTCCTGCATACAAACCAACCCTCAATCTCGACCGACCATGAGAACCATTGCCAACATGATTGAAACAGAGACTTTTCATTAG 1215 0.3794 MQSLSILNLSYNNLEGPIQDSGIFSSSNLVDLSHNKNLCGRIQGLQPCNVKVIKPVRGSNKRKVVIIVTTSIATALIVLFVLLLIYVILSKRNSRSLEQKARVNRENPFSIWHFDGKIMYDNIIEATENFHEKYCIGAGAFGKVYKLTLPGEDKVFAIKKFVCEENSLDIKNIKAFENEIKAMIKTRHRNIVKLYGFCSQRLHTFLIYEHIKRGSLFDMLRNDKEALELGWSQRAHIIKGLAEALSYIHHDCNPAIVHRDISSKNVLLSSNFEVHLSDFGTARFLKIYSSIWTTFAGTYGYAAPELAYTMAVTEKVDVYSFGVLAIELLMGEHPGDFISCIQMCGNGHIILEDILDPRLSSMKHQNSNKLALIWQIALSCIQTNPQSRPTMRTIANMIETETFH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5179g00006 404 PANTHER LEUCINE RICH REPEAT KINASE 2 1 401 - -
Pral5179g00006 404 FunFam MDIS1-interacting receptor like kinase 2 211 404 - -
Pral5179g00006 404 Gene3D Transferase(Phosphotransferase) domain 1 211 403 - -
Pral5179g00006 404 FunFam Leucine-rich repeat receptor protein kinase MSP1 92 210 - -
Pral5179g00006 404 SUPERFAMILY Protein kinase-like (PK-like) 108 398 IPR011009 -
Pral5179g00006 404 Gene3D Ribonuclease Inhibitor 1 53 IPR032675 -
Pral5179g00006 404 ProSitePatterns Protein kinases ATP-binding region signature. 136 160 IPR017441 GO:0005524
Pral5179g00006 404 ProSitePatterns Tyrosine protein kinases specific active-site signature. 256 268 IPR008266 GO:0004672|GO:0006468
Pral5179g00006 404 ProSiteProfiles Protein kinase domain profile. 130 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00006 404 Pfam Protein kinase domain 131 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00006 404 Gene3D Phosphorylase Kinase; domain 1 90 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5179g00006 Pral-Chr5179 216909 218216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5179g00006 1 304 Receptor kinase-like Gene Family AT4G08850 45.161 2.10e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5179g00006 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5179g00006 - - gmx:100814345 486.108