Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5179g00005 ATGGCTCAGCATGAACCTTGTATCTTCCTTGCATTTAATCTTATCTTCTCGCTTTTTTGGTCACCATGCAAGTTCAGTGCAGGACTTTCTGAAGCTGAAGCTCTAATCAAATGGAAGCACAGTCTCCCACAGCAACCAATATTGGATTCATGGTTCCTTCCACTTTTCAACAACGTTCAAAGCCCATGTTCATGGCGTGGAATAGCTTGTGATAATTCTACAGGAAGTGTCATCGGAATAAACTTGGCACACACAGGCCTTGAAGGTACCCTTCAAAACTTGAACTTTTCTGCATTTCCGAATCTTCTTCGTCTTGATCTCAACTCAAACAACCTCACTGGTAGCATACCAGAAGACATTGGGGTCCTCACTAAACTACAAATCCTTGATCTTAATACTAATCTCCTCAATGGCACTTTACCTCTTTCTCTTGCCAATTTGACTCAAGTTTATGAACTTGATTTTTCCCGAAACCACATAACTGGAATATTAGACCCACGTCTTTTTCCAGATGGTTCTGATCAACCTAAGATTGGATTGATTGGGATTAGAAATCTTCTCTTTCAAGACACCAAGCTTGGTGGCAGAATTCCTAACGAAATAGGGAATATAAGAAATTTAGCTGTGTTGGCTCTAGATGGGAATAACTTCTTTGGGCCTATTCCTTCATTCCTCGGAAACTGTACACATTTAAGTGTTCTTAGGATGTCTGAAAACCAACTCTCAGGCATGATCCCCCCAAGTTTTGGTAGATTGACTAATCTATCTGATGTGCGCTTCCACATAAATAAATTATATGGCCCTGTTCCCCAAGAATTCGGAAATCTCTCTTCTTTAACGGTCTTGCATCTTGCTCAAAACAACTTCTCTGGAGAGTTGCCACCACAAGTTTGCAAAGGTGGAAAGCTTGTCAATTTCAGTGCTGCCTACAATAGTTTCACTGGTCCAATCCCCATGAGCCTAAAAAATTGCCCATCCTTATTTAGAGTTCGACTTGAACATAACCAACTGACAGGTTACGCAGATCAAGATTTTGGAGTGTATCCCAATCTTAATTACATTGACATCAGCTACAATAAGGTACAAGGGAAACTTCCTGCACAATGGAGTGCTTGCAAGAGGCTACAATCTCTTGTAATGGCTGGAAACTCAATCAATGGCACTATACCAGATGAGATTTTTCAATTGGACCAATTAGAGAGACTTGATCTATCTTCCAACCAAATATCTGGAGAGATTCCTCCCCAGATAGAGAATTTCCGTAGGATGTCTGTTTTATCTTTGAGCAGCAATAAACTGTCAGGTTTCCTACCAACTGGCATTGGGAAGCTGTCAAATTTGCAAACTTTAGACTTGTCATCAAACATGCTTAGAGGACAAGTCCCATCCCAGATAGGTGATTGCACAGACTTGTTGCGTTTAAACTTGAGCAATAATGACTTCATTGGCAAAGTCCCATACCAAATTGGAAATCTTGAATTCTTACAAGATTTTTTGGACTTGAGTTTTAACTCACTTTCTAGTGAAATCCCTGTGGATCTTAGTACACTCAAAAACTTGATAAGTTTGAATATGTCTCACAATAATTTGTCAGGTCCTATCCATAGTTCCCTAACGACAATGCAAAGCTTGTCAATCCTCAACCTCTCCTACAATAATTTGGAGGGGCCAATACAAGATGGTGGGATTTTTAGTTCTTCCAATCTAGTGGATTTGAGTCACAACAAAAACTTATGCGGGAGGATCCAAGGTTTGCAACCATGCAATGTGAAGGTTATAAAACCAGTTAGAGGAAGTAACAAAAGGAAAGCTGTGATAATTGTTACTACCTCTATAGCAACTGCACTGATTGTTTTGTTTGTGCTACTTTTGATTTATGTCATTCTAAGAAACTCTAGAGCTTTAGAACAGAAAGCTAAAGTCGATAGGGAAAATCCATTCTCAATATGGCACTTTGATGGCAAAATCATGTATGATGACATAATTGAAGCGACTGAGAACTTTCATGAGAAATACTGCATAGGTGCAGGGGCATTTGGAAAAGTCTACAAGTTGACATTGCCAGGGGAGGATAAAGTATTTGCTATAAAAAAGTTTGTATGTGAGGAAAATAGCTTAGACATTAAGAATATAAAAGCTTTTGAGAATGAGATCAAAGCCATGATCAAAACTCGCCACCGAAACATTGTGAAGTTGTATGGATTCTGCTCACAAAGGTTGCACACATTTCTAATTTATGAGTACATCAAAAGAGGGAGCTTATTTGATATGCTTAGAAACGATAAAGAAGCATTAGAGTTGGGTTGGTCACAGAGGGCTCATATTATCAAGGGGTTAGCAGAGGCCTTATCATATATGCATCATGATTGTAATCCAGCCATTGTTCACAGAGACATATCAAGCAAGAATGTTTTATTATCTTCAAATTTCGAAGTCCATCTCTCAGACTTTAGCACAGCAAGGTTCTTGAAAATCTATTCATCAATTTGGACCACTTTTGCTGGCACATACGGTTATGCTGCTCCAGAGCTTGCATACACAATGGCAGTGACTGAGAAAGTTGATGTGTATAGCTTTGGTGTTTTGGCCATTGAGTTGCTAATGGGAGAGCATCCTGGTGATTTTATATCATGTATTCAGATGTGTGGGAATGGCCATATCATCTTGGAAGATATTTTGGACCCTCGTTTATCATCAATGAAGCACCAAAACTCTAACAAATTGGCTTTGATTTGGCAAATAGCTCTTTCCTGCATACAAACCAACCCTCAATCTCGACCGACCATGAGAACCATTGCCAACATGATTGAAACAGAGACTTTTCATTAG 2829 0.3927 MAQHEPCIFLAFNLIFSLFWSPCKFSAGLSEAEALIKWKHSLPQQPILDSWFLPLFNNVQSPCSWRGIACDNSTGSVIGINLAHTGLEGTLQNLNFSAFPNLLRLDLNSNNLTGSIPEDIGVLTKLQILDLNTNLLNGTLPLSLANLTQVYELDFSRNHITGILDPRLFPDGSDQPKIGLIGIRNLLFQDTKLGGRIPNEIGNIRNLAVLALDGNNFFGPIPSFLGNCTHLSVLRMSENQLSGMIPPSFGRLTNLSDVRFHINKLYGPVPQEFGNLSSLTVLHLAQNNFSGELPPQVCKGGKLVNFSAAYNSFTGPIPMSLKNCPSLFRVRLEHNQLTGYADQDFGVYPNLNYIDISYNKVQGKLPAQWSACKRLQSLVMAGNSINGTIPDEIFQLDQLERLDLSSNQISGEIPPQIENFRRMSVLSLSSNKLSGFLPTGIGKLSNLQTLDLSSNMLRGQVPSQIGDCTDLLRLNLSNNDFIGKVPYQIGNLEFLQDFLDLSFNSLSSEIPVDLSTLKNLISLNMSHNNLSGPIHSSLTTMQSLSILNLSYNNLEGPIQDGGIFSSSNLVDLSHNKNLCGRIQGLQPCNVKVIKPVRGSNKRKAVIIVTTSIATALIVLFVLLLIYVILRNSRALEQKAKVDRENPFSIWHFDGKIMYDDIIEATENFHEKYCIGAGAFGKVYKLTLPGEDKVFAIKKFVCEENSLDIKNIKAFENEIKAMIKTRHRNIVKLYGFCSQRLHTFLIYEYIKRGSLFDMLRNDKEALELGWSQRAHIIKGLAEALSYMHHDCNPAIVHRDISSKNVLLSSNFEVHLSDFSTARFLKIYSSIWTTFAGTYGYAAPELAYTMAVTEKVDVYSFGVLAIELLMGEHPGDFISCIQMCGNGHIILEDILDPRLSSMKHQNSNKLALIWQIALSCIQTNPQSRPTMRTIANMIETETFH 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5179g00005 942 FunFam Leucine-rich repeat receptor-like protein kinase TDR 273 590 - -
Pral5179g00005 942 Gene3D Ribonuclease Inhibitor 26 107 IPR032675 -
Pral5179g00005 942 Gene3D Phosphorylase Kinase; domain 1 631 748 - -
Pral5179g00005 942 FunFam Leucine-rich repeat receptor protein kinase MSP1 630 748 - -
Pral5179g00005 942 FunFam Leucine-rich repeat receptor-like protein kinase 749 941 - -
Pral5179g00005 942 Gene3D Ribonuclease Inhibitor 108 174 IPR032675 -
Pral5179g00005 942 SUPERFAMILY RNI-like 63 270 - -
Pral5179g00005 942 FunFam Nuclear pore complex protein NUP107 29 169 - -
Pral5179g00005 942 ProSitePatterns Protein kinases ATP-binding region signature. 674 698 IPR017441 GO:0005524
Pral5179g00005 942 PANTHER LEUCINE RICH REPEAT KINASE 2 225 939 - -
Pral5179g00005 942 ProSiteProfiles Protein kinase domain profile. 668 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00005 942 PRINTS Leucine-rich repeat signature 444 457 - -
Pral5179g00005 942 PRINTS Leucine-rich repeat signature 399 412 - -
Pral5179g00005 942 Pfam Protein kinase domain 669 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5179g00005 942 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Pral5179g00005 942 Pfam Leucine Rich Repeat 398 420 IPR001611 GO:0005515
Pral5179g00005 942 SUPERFAMILY Protein kinase-like (PK-like) 647 936 IPR011009 -
Pral5179g00005 942 SMART LRR_typ_2 444 468 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 541 566 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 492 517 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 123 146 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 99 121 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 147 171 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 396 420 IPR003591 -
Pral5179g00005 942 SMART LRR_typ_2 276 300 IPR003591 -
Pral5179g00005 942 Gene3D Ribonuclease Inhibitor 459 589 IPR032675 -
Pral5179g00005 942 ProSitePatterns Tyrosine protein kinases specific active-site signature. 794 806 IPR008266 GO:0004672|GO:0006468
Pral5179g00005 942 Pfam Leucine rich repeat 422 481 IPR001611 GO:0005515
Pral5179g00005 942 Gene3D Ribonuclease Inhibitor 178 303 IPR032675 -
Pral5179g00005 942 Gene3D Transferase(Phosphotransferase) domain 1 749 941 - -
Pral5179g00005 942 Gene3D Ribonuclease Inhibitor 304 458 IPR032675 -
Pral5179g00005 942 SUPERFAMILY RNI-like 245 577 - -
Pral5179g00005 942 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 178 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5179g00005 Pral-Chr5179 198782 201703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5179g00005 1 842 Receptor kinase-like Gene Family AT4G08850 40.996 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5179g00005 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5179g00005 - - aprc:113866080 1200.27