Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5177g00019 ATGGCGACTCTTGTGCTATTCGCGCCGAACGCAACCTCTTCGCCTTTCTCTTACCGGCCGAACTCTAGGACTAGCCCTCTCCTTCATCGGCCTCACCACCACCACAATCTTTCCCGTTCCGGGAACTTACTTGGACGTTCGCTTTCCGTCACGAGGTTCGCCTTCAAGCCTGGTTTTCTACCTGAACCTCATGGCGCTGAGGACCTGGTGAAGGACTTGCTTAGTCGAGCTGACGCTTTTCTGTACACTATTGCCGACGCTGCTGTTTCATCCTCCGATACGGTGACTACCACTGCCAAACAGAACAACGATTGGCTTTCTGGTATTACCGGTTATATGGAGAGTGTTCTCAAGGTATTGAAGGATGGGCTTTCTGCCTTGCACGTACCATATGCGTATGGTTTTGCCATTATACTCCTTACAATTCTCGTTAAGGCTGCTACATTTCCATTGACAAAGAAGCAGGTAGAATCTTCCTTGGCTATGCGGTCTCTGCAACCTCAGATAAAGGCTATTCAGCAACGTTATGCTGGTGACCAGGAAAGGATCCAACTTGAGACTGCTCGGTTATATAAATTGGCTGGCATTAATCCTCTAGCAGGATGCCTGCCTACACTTGCAACAATACCTGTATGGATTGGTTTATATAGAGCACTTTCAAATGTGGCTGATGAGGGACTTCTCGCAGAGGGGTTCTTCTGGATACCTTCCCTCGCTGGTCCAACTACAATTGCTGCCCGTCAAAATGGAAGTGGCATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCACCCCTTGGATGGTCAGATACATTGGCGTACCTTGTGTTGCCTGTATTACTGGTTATCACTCAGTACATTTCTGTCCAAATAATGCAGTCGTCACAGCCTAATGATCCCAGCATGAAGAGTTCTCAGGCTCTAACTAAGTTCCTTCCTTTAATGATTGGTTACTTTGCTCTGTCAGTTCCTTCTGGGTTAAGTCTTTACTGGTTCACAAATAATATATTGAGCACAGCACAACAAGTATGGCTTCAAAAACTTGGAGGGGCCAAAAACCCAGTGATGCAAGTACGTGATAAAACAGTGGATGACAATGTAATGCAAATTCAGAAATCAGTCTCTGAGCTAGAGCCCCCTAAAATAGAGGCCAGTCTAGGTGAGAAATCGACATCAGAGGGACCAAAACCAGGGGACAGATTTAAGCAAATAAAGGAGCAAGAGGAAAAGAGAAGAAGACAGAGAGAAGAAGAAAAAAGGAAAGCTGAGGAGGCAGCAGCTAAAGCAACTGAAGTACACGAGGCAAGGGACAAAAAGACTGAGGTTGGAGATGAGGATGGAGATGATGGAATTGCTGTAAAATCTGATGCTGTGACTGCAAATGATGATCCTTCTACTTCTGGAATTGTTGTGAATGGCAATCCCTCCAGTGAGGGCTTTGGGAGATATCAAAAAGCCACATCTGCATTGCATACAGAAAATAAAGGTTCTGCTGATTACCAGTTCAATGAAAGGAATGAGAGAAGTCTAGAAAAGGAAACAGAAGTATACACACCTGCTGCCACAGACAGCAAGACACCCGTTGAAGACCCAGATCAAGTGACAAAGGACTGA 1614 0.4579 MATLVLFAPNATSSPFSYRPNSRTSPLLHRPHHHHNLSRSGNLLGRSLSVTRFAFKPGFLPEPHGAEDLVKDLLSRADAFLYTIADAAVSSSDTVTTTAKQNNDWLSGITGYMESVLKVLKDGLSALHVPYAYGFAIILLTILVKAATFPLTKKQVESSLAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLAEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVITQYISVQIMQSSQPNDPSMKSSQALTKFLPLMIGYFALSVPSGLSLYWFTNNILSTAQQVWLQKLGGAKNPVMQVRDKTVDDNVMQIQKSVSELEPPKIEASLGEKSTSEGPKPGDRFKQIKEQEEKRRRQREEEKRKAEEAAAKATEVHEARDKKTEVGDEDGDDGIAVKSDAVTANDDPSTSGIVVNGNPSSEGFGRYQKATSALHTENKGSADYQFNERNERSLEKETEVYTPAATDSKTPVEDPDQVTKD 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5177g00019 537 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Pral5177g00019 537 PANTHER OXA1 86 412 IPR001708 GO:0016020|GO:0032977
Pral5177g00019 537 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Pral5177g00019 537 MobiDBLite consensus disorder prediction 498 514 - -
Pral5177g00019 537 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Pral5177g00019 537 MobiDBLite consensus disorder prediction 374 537 - -
Pral5177g00019 537 Coils Coil 401 435 - -
Pral5177g00019 537 MobiDBLite consensus disorder prediction 393 452 - -
Pral5177g00019 537 MobiDBLite consensus disorder prediction 14 40 - -
Pral5177g00019 537 MobiDBLite consensus disorder prediction 459 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5177g00019 Pral-Chr5177 119223 124147 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5177g00019 31 419 Chloroplast and Mitochondria Gene Families AT2G28800 52.911 7.22e-135 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5177g00019 K03217 - gmx:100802546 657.136