Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5177g00012 ATGTGGCAGAATCATCCCCATAAATCTTCTTCTTCTTCTTTAAGAGATTCTATTGTGGCTCTCGAAGCTGATATTCAGCATGCCAATATCCTGGCGGCATCACTGCCAAGAGGTTATGGAGGGGACCACATTCAGATGAAACTATCATACAGTCCTTTGGCTCCTTTATTCCTTCATTTGATCCAATGGATGGATTTCACTTGTACCGATTCTCTCCCCACCTCTCTTGGCTTATTTCACATCCTCATTTACAAGGTGTACGGAGATGGATTGCCGTCCTTATCCTCCAAAGAAAGAAAAGCCTCCCTCAAGGATTTTTACGGTGTAATATACCCATCACTGAGGCTACTTGAAGGGGAGTTAAAAGCACAAGAAGCTAAAGATAAAGGAAATAATCGAACACATCAAGTTGTGAGCAGAAAGAGCCCAAATAAGAAAGGGTTAGAAAATAAAGAACAAGAGTTGAGAGATGATGAATGTGGAATCTGCATGGAGATGAGCATGATCATGGTCCTCCCTAATTGTGGCCATTCCTTGTGCATCACCTGCTTCCATGACTGGAATGTGAGATCAGAGTCATGCCCGTTCTGCAGAGGAAGCCTGAAGAGGGTGAGTTCAAGAGATCTGTGGGTTGTGATAGACGAGAGAGAAGTGGCTGACAGAGTCACAGTGGCAAAAGACAACCTCACACGCTTCTATCTTTACATGGAATCCCTCCCTCTTCTTTCTCACGATCCTCCTCCTCATCTCTTCCTCTTCAACTACATGCTTTGA 774 0.4406 MWQNHPHKSSSSSLRDSIVALEADIQHANILAASLPRGYGGDHIQMKLSYSPLAPLFLHLIQWMDFTCTDSLPTSLGLFHILIYKVYGDGLPSLSSKERKASLKDFYGVIYPSLRLLEGELKAQEAKDKGNNRTHQVVSRKSPNKKGLENKEQELRDDECGICMEMSMIMVLPNCGHSLCITCFHDWNVRSESCPFCRGSLKRVSSRDLWVVIDEREVADRVTVAKDNLTRFYLYMESLPLLSHDPPPHLFLFNYML 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5177g00012 257 MobiDBLite consensus disorder prediction 125 152 - -
Pral5177g00012 257 SMART ring_2 160 197 IPR001841 -
Pral5177g00012 257 SUPERFAMILY RING/U-box 151 203 - -
Pral5177g00012 257 Pfam Zinc finger, C3HC4 type (RING finger) 157 203 - -
Pral5177g00012 257 PANTHER RING FINGER PROTEIN 41, 151 12 252 - -
Pral5177g00012 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 219 IPR013083 -
Pral5177g00012 257 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5177g00012 Pral-Chr5177 64573 69045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5177g00012 107 202 C3H Transcription Factor Family AT5G01960 29.000 2.90e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5177g00012 - - pcin:129293983 410.994