Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5176g00008 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAGTGCGGAGCTCCCTCCTCCTCCGCCGCCACTTCAACAACCTCAGCAACATCAAATGATCCTCGGCGACAGTAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTGCAAGACGAAACGAGAAACCTCATTGCTTTTCGCCGCGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGGGAAGATGAGAGATAAGGGATTTGATCGATCACCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCGTATTACAAAGACATTGAAGAGATTTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAACCCTACTCCTTCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACCAACATTTCTTTCGGGCCTGTTGAAGTTTCAGCCACTGGCAGATCAACACTCAATCTTGAGAATCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGGGTTCCTCCTTGGAGTTGGCGAGAAACTCCTATAAGCAATGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTTAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGATCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGACTTTCTGGCTCGGCGAGGCTGGACATCTCTAAGGGAACTTGATGGATATAGAAACATTGATAACTTCGATGATCTTCAACCTGGTGCCATGTATCGTGGTGTGAGTTGA 1146 0.4468 MYLSEKPRPIDFYKEEATPDMMIEVASSAELPPPPPPLQQPQQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISGKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKNPTPSKVESYMQFSDKGMEDTNISFGPVEVSATGRSTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISNGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTSLRELDGYRNIDNFDDLQPGAMYRGVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5176g00008 381 Gene3D - 70 132 - -
Pral5176g00008 381 FunFam trihelix transcription factor GT-1 70 132 - -
Pral5176g00008 381 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Pral5176g00008 381 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
Pral5176g00008 381 SMART sant 66 128 IPR001005 -
Pral5176g00008 381 CDD GT1 68 133 - -
Pral5176g00008 381 MobiDBLite consensus disorder prediction 21 46 - -
Pral5176g00008 381 PANTHER FI21293P1 44 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5176g00008 Pral-Chr5176 38027 42716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5176g00008 20 380 Trihelix Transcription Factor Family AT3G25990 67.742 4.30e-175 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5176g00008 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5176g00008 - - pcin:129298584 650.588