Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5176g00007 ATGTATTTATCGGAGAAACCCCGACCCATCGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAGTGCGGAGCTCCCTCCTCCTCCGCCGCCACTTCAACAACCTCAGCAACATCAAATGATCCTCGGCGACAGTAGTGGCGAGGACCACGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTGCAAGACGAAACGAGAAACCTCATTGCTTTTCGCCGCGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGGGAAGATGAGAGATAAGGGATTTGATCGATCACCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAGTTTAAGAAGGCGAAGCATCAAGATAGGGGAGCTGGTTCCGCTAAGATGTCGTATTACAAAGACATTGAAGAGATTTTGAAAGAGAGGAGCAAGAGTGTGTGCTACAAGAACCCTACTCCTTCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTATGGAGGATACCAACATTTCTTTCGGGCCTGTTGAAGTTTCAGCCACTGGCAGATCAACACTCAATCTTGAGAATCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGTTGGCACAAGTGGGGTTCCTCCTTGGAGTTGGCGAGAAACTCCTATAAGCACAGATGGGGAAGGTCAATCATGTTGTGGGAGGGTCATAACAGTTAAATGGGGCGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAAGCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAATAAGGAGTCTTGACCGAGATATGCCTTTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGATCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGACTTTCTGGCTCGGCGAGGCTGGACATCTCTAAGGGAACTTGATGGATATAGAAACATTGATAACTTCGATGATCTTCAACCTGGTGCCATGTATCGTGGTGTGAGTTGA 1149 0.4473 MYLSEKPRPIDFYKEEATPDMMIEVASSAELPPPPPPLQQPQQHQMILGDSSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISGKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKNPTPSKVESYMQFSDKGMEDTNISFGPVEVSATGRSTLNLENRLDHDEHPLAITAADTVGTSGVPPWSWRETPISTDGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRSKRLFWLEDEYQIIRSLDRDMPLGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTSLRELDGYRNIDNFDDLQPGAMYRGVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5176g00007 382 Gene3D - 70 132 - -
Pral5176g00007 382 FunFam trihelix transcription factor GT-1 70 132 - -
Pral5176g00007 382 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Pral5176g00007 382 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
Pral5176g00007 382 PANTHER FI21293P1 44 356 - -
Pral5176g00007 382 SMART sant 66 128 IPR001005 -
Pral5176g00007 382 CDD GT1 68 133 - -
Pral5176g00007 382 MobiDBLite consensus disorder prediction 21 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5176g00007 Pral-Chr5176 38027 42717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5176g00007 20 381 Trihelix Transcription Factor Family AT3G25990 67.560 1.70e-173 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5176g00007 Myb_DNA-bind_4 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5176g00007 - - pcin:129298584 645.58