Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5175g00028 ATGGCTTCCGCCTGTGCTTCTTCCGCCGTCGCCATCGCCACCCCAAGTTCTCAGAAGAATGGAAGCATCTTGGGAACAAGGACTTCGTTTCTGAGCGGAAGGAAGTTGAGGGTGAACAAGTTTACAGTCGGAGGACGATCTGTGAGTAGCAGAGTGTGTGCGGCGGCGGCTGATCCTGACAGACCTCTCTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGACGGCAGCCTTCCCGGAGACTTCGGCTTTGATCCTCTCGGTCTCGGATCTGATCCAGAGAGCCTGAGATGGAATGTTCAAGCGGAGCTGGTTCATTGCAGATGGGCAATGCTGGGTGCTGCTGGAATTTTCATCCCAGAGTTCCTAACAAAGATTGGTATTCTCAACACTCCTTCGTGGTACTCTGCTGGAGAGCTGGAATACTTCACAGACACCACCACCCTCTTCATCATTGAGCTCATCTTCATCGGATGGGCAGAGGGAAGAAGATGGGCCGACATCCTCAAGCCCGGCAGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACAGGCACTGATGTGGGTTACCCGGGTGGGCTCTGGTTTGACCCATTGGGCTGGGGCTCCGGCTCGCCTGAGAAGGTCAAAGAGTTGAGAACAAAAGAGATTAAGAATGGAAGATTGGCCATGTTGGCTGTGATGGGTGCTTGGTTCCAGCACATCTACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACTTAGCAGACCCTGGCCATGCCACCATTTTTGCTGCTTTTTCACCCAAGTGA 801 0.5393 MASACASSAVAIATPSSQKNGSILGTRTSFLSGRKLRVNKFTVGGRSVSSRVCAAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIIELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5175g00028 266 Pfam Chlorophyll A-B binding protein 70 236 IPR022796 -
Pral5175g00028 266 SUPERFAMILY Chlorophyll a-b binding protein 54 263 - -
Pral5175g00028 266 FunFam Chlorophyll a-b binding protein, chloroplastic 71 256 - -
Pral5175g00028 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 262 IPR001344 GO:0009765|GO:0016020
Pral5175g00028 266 Gene3D Chlorophyll a/b binding protein domain 71 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5175g00028 Pral-Chr5175 146355 148060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5175g00028 49 266 Chloroplast and Mitochondria Gene Families AT3G61470 89.908 8.26e-149 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5175g00028 K08908 - gmx:100784089 491.886