Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5175g00021 ATGCCAAAAAACGAAGTGGTTCTGCAAATCCAAGAAAAGGAAGAAGCTTTGTATGCGAAGAAAGAGTCCCAGATGGATTCTTCGCCGGAGATAAGAAACGTAAGCCCAAAACCCAGTAAGCCACCAAAATTTCCGACAGAGACAATAATCAAACGAAGGTCACTGTCAAGGTCGGAATTCTCGAAGCCAAAATCGAGATTAGTGGAACCACAGTATCAGACTGACCCCAAATTTCTCGGAGGAAAAACTCAGATGATAGGTTATGATTCATCGTCTAATAGGAATTCTCCGAATGTGACTTCACCTATGAACAAAAATACAACGACTACTCCAAGGAGTAATATCAGTACAGCTCCAGTAACCCCACGAACGCCATTGAAAGGGATAGAAGGAGAAGATGAAGAAGATGAAGATGAAGAAGTGTATAAAACTGCTCATCTTGAAGTGAGCAAGAGATCAGGCAAGAAAAAGTTGAAACTAATGGCTTTAATTGAATGGAGTGCTTTTGTTTGCATCATGGCTGCTTTGGTATCGAGCGTGACCATCCATAAACTGCAAAATACGGTGATTTGGAGTCTGAATCTATGGAAATGGTGCGTTTTACTGTTGGTAATTATCTGTGGTAGAATAATCACTCAGTGGTTCATCAACATTCTGGTTTTCTTGTTCGAGAGGAACTTCATATTCAAAAGGAAGGTTCTTTATTTTGTTTACGGGCTTAAGAAGAGCGTTCAGGCCTTCATTTGGTTAGCTTTGGTTCTTCTAACATGGTTTCTTCTGTTCAATCATGGAGTTAAAAGATCCAGAAGAGCCAGAAAAATTCTGAGTTACATAACAAGAGCGCTCGCTTCTTGCCTCATAGGATCAGCCATATGGCTTATAAAAACTTTACTCATAAAGCTACTAGCTTCTTCTTTCCAATGCACCAGATTCTTCGACAGGATTCAAGAATCAATCATTCATCAATACATTCTTCAGGTTCTCTCGGGGCCTCCATTGATGGAGATGGCTGAAATGGTGGGGAGAAGTGCGAGCACTGGTCAGCTCAGTTTCAGGACATTGAACAAAGAGAAGAAAGCACAGAAAGAAGAAGTCATTCATGTGGACAAGTTGAAGAAGATGAAGCAAGACAAGGTTTCTGCTTGGACAATGAGAGGGTTAGTTAATGTGATAAGGAATTCTGGGTTGTCCACCATACCAGACACACTCGAAAGCTTTAATGACGAGGAAGGAGAGCAGAAAGACAGGGAAATTAACAGTGAGTGGGAAGCAAAAGCAGCAGCTTATAGAATTTTCAAGAATGTAGCCAAGCCTGGAAATAAGTACATTGAAGAGGAAGATCTCTTGAGATTCATGAAAGAAGAAGAGGTGGAGAATGTGCTTCCTTTGCTTGAAGGAGCTGTGGAAACTGGAAAGATAAAGAGGAAGTCCCTCAAGAACTGGCTGGTAAAAGTTTACTTGGAGCGCAAGTCACTGGTTCATTCCTTAAACGACACAAAAACTGCTGTTGACGAACTGAACAAGCTAGCTTCGGTCTTGGTTCTCGTAATAATCATCATAGTGTGGCTTCTTTTAATGGGATTCCTAACAACTAAAGTGCTTCTCTTCATTTCATCTCAGCTTTTACTTTCTGCGTTCATGTTTGGAAACACAGCCAAGACTTTGTTCGAAGCCATCATATTTGTCTTCGTAATGCACCCTTTTGACGTTGGAGATCGCTGTGTCATCGATGGTGTACAGATGATAGTGGAAGAGATGAATATATTGACGACAGTGTTCTTAAGATATGACAACGAGAAGATATTCTATCCAAATTCAGTTCTAGCCACCAAACCAATCAGCAATTTTTACAGAAGCCCAGAAATGAGTGATTCAGTTGAATTTGCTGTTGATGTTTCTACCTCCATGGAAACCATTGGTGCTTTGAAAGCTGGAATAAAAGCATACCTGGAGGGCAAGCCTCAGCATTGGCGAGCTGGGCACAGTGTGGTGGTGAAGAATATAGAGAACGTGAACAAGATGAATATGGCACTCTATGTGACTCACACCATTAATTTTCAAAACTATGGAGAGAAGAGCAGCCGAAGATCAGAGCTTGTGCTGGAATTGAAGAAAATTTTCCAACTTCTTAATATTAATTATCATCTTCTTCCTCAAGATGTTCATCTCAGTTATGTGGGACCAGAAGCACCCTCTACCATCTGGAGATGA 2211 0.4093 MPKNEVVLQIQEKEEALYAKKESQMDSSPEIRNVSPKPSKPPKFPTETIIKRRSLSRSEFSKPKSRLVEPQYQTDPKFLGGKTQMIGYDSSSNRNSPNVTSPMNKNTTTTPRSNISTAPVTPRTPLKGIEGEDEEDEDEEVYKTAHLEVSKRSGKKKLKLMALIEWSAFVCIMAALVSSVTIHKLQNTVIWSLNLWKWCVLLLVIICGRIITQWFINILVFLFERNFIFKRKVLYFVYGLKKSVQAFIWLALVLLTWFLLFNHGVKRSRRARKILSYITRALASCLIGSAIWLIKTLLIKLLASSFQCTRFFDRIQESIIHQYILQVLSGPPLMEMAEMVGRSASTGQLSFRTLNKEKKAQKEEVIHVDKLKKMKQDKVSAWTMRGLVNVIRNSGLSTIPDTLESFNDEEGEQKDREINSEWEAKAAAYRIFKNVAKPGNKYIEEEDLLRFMKEEEVENVLPLLEGAVETGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAVDELNKLASVLVLVIIIIVWLLLMGFLTTKVLLFISSQLLLSAFMFGNTAKTLFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDSVEFAVDVSTSMETIGALKAGIKAYLEGKPQHWRAGHSVVVKNIENVNKMNMALYVTHTINFQNYGEKSSRRSELVLELKKIFQLLNINYHLLPQDVHLSYVGPEAPSTIWR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5175g00021 736 MobiDBLite consensus disorder prediction 46 64 - -
Pral5175g00021 736 Pfam Mechanosensitive ion channel 507 713 IPR006685 GO:0016020|GO:0055085
Pral5175g00021 736 MobiDBLite consensus disorder prediction 85 121 - -
Pral5175g00021 736 MobiDBLite consensus disorder prediction 18 137 - -
Pral5175g00021 736 PIRSF Memb_At2g17000 4 734 IPR016688 -
Pral5175g00021 736 FunFam Predicted mechanosensitive ion channel 567 616 - -
Pral5175g00021 736 Gene3D - 567 616 IPR023408 -
Pral5175g00021 736 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 20 726 IPR016688 -
Pral5175g00021 736 SUPERFAMILY Sm-like ribonucleoproteins 557 616 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5175g00021 Pral-Chr5175 118852 121634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5175g00021 28 724 Mechanosensitive Ion Channel Family AT5G12080 54.416 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5175g00021 K22048 - tcc:18588316 989.178