Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5175g00010 ATGGCCGTCTTCCTTCCTTCTTCTCATACTATATTTCTTGCACTCCTTTTCTTTTCCATCACCCTTGTTACAGCTCAATCGCCAACCAACAACAGTGGAACAAACTTCTCATGCCCTGCAGATTCACCACCTTCCTGTGAAACGTATGTATCATACTATGCACAGTCTCCAAATTATCTGAGTCTAGTGAACATATCTGATGTATTTGGGATCAGTCCTTTGTCCATTGCAAGGGCTGGTAACTTATCAGAAGAAGAAAATAAGTTGATTCCAGGCCAGCTCTTACTGGTTCCTGTGACTTGTGGTTGTACTGGAAACCGCTCTTTCGCCAATATAACCTACGAGATCAAGCCGGGTGATAGCTACTACTTTGTTTCAACCAGTGCATTTGAGAATCTCACGAATTGGCATGTAGCGCGAGAGTTTAACCCTGGTTTGAATCCAGTTATTTTGCCGATAGGCACCAAAGTGGTCTTCCCTTTGTTCTGCAGGTGCCCTTCAAGAAGCCATTTGGCCAAAGGCATAAAGTTTTTGATAACGTATGTTTGGCAACCTAGTGACAATGTTTCTGTCGTTGGTACCATGTTTAATGCATCTGAGATGGACATAAGGACAGAAAACAAATACCAGAACTTTAACTCTGCAGCCAACCTTCCAGTTTTGATCCCAGTGTCGGAGCTTCCAGATGTTTCTCGATTTCATTCATTACCAAAGAGAAAGGGAAACAACCATCGTCTTTTGGTTATCGTAGGTACTATATTGGGATGCACTTGTCTGACTGTTCTTGTAACTTTTTTACTGGTCTATGTTTGTTGTCTAAGAAAGAAAAAGATTAGTTTGAAAAAGAGTGCTTCATTTTTGGAGACAGCAGATAAGCTACTTTCTGGGGTCTCAGGTTATGTAAGCAAGCCAACCATGTACGAGTTTAATGTAATTATGGAAGCAACCATGAATCTTAATCAACAGTGCAGGATTGGGGGATCAGTGTATAAGGCCAAAATTGACGGGCAAGTCTTAGCAGTAAAGAAAGTGAAGGAAGATGTCATGGAGGAACTGAAGATTCTGCAAAAGGTGAATCATGCGAATCTGGTGAAATTAATGGGCTTCTCATCAGACGACAATGTCGGAAATTGCTTCTTGGTTTATGAATATGCTGAAAATGGATCTCTTGATAATTGGCTGTATTCCATGTCTGCTTCAGACTCTTCTTCTGGTTCTGTGTCATTTCTCACATGGAGCCAAAGGATTTGCATTGCCCTAGACGTGGCCATGGGTTTGCAATACCTTCATGAGCACACCCAACCAAGAATAGTCCACAGGGACATCAGAACAAGTAACATAGTTCTGGATTCAAGTTTCAAGGCGAAGATAGCGAACTTCTCAATGGCAAGAACTTCTACGAACCCAATGATGCTAAAAACAGATGTTTTTGCTTTTGGGGTTGTTTTGTTGGATTTGCTGACAGGGAAGAAAAGCATGATGACAAATGAAAGAGGCGAGGTAGTGATGCTGTGGAAGGACATGAGAGGGATCATTGATGGAGAAGATGAGAAGAAGAAAGAGGAGAGACTGAGAAGATGGATGGATCCTAAGCTGGGAAGCTTCTATGCCATTGATGATGCTCTGAGCTTGGTTTCCTTGGCTGTGACTTGCACTGCAGATAAACCTTTGTCCAGACCAACCATGGCAGAAGTCGTTCTTAGCCTGTCGTTTCTGAGTCAATCATGTGCTGGCGTGAAGGTAGAACCATGGACTTCTGCTGGTGGGTTAGATGCAGAAGTTCCTCAAACGATAAGTCCCATCGCAGCTCGATGA 1815 0.427 MAVFLPSSHTIFLALLFFSITLVTAQSPTNNSGTNFSCPADSPPSCETYVSYYAQSPNYLSLVNISDVFGISPLSIARAGNLSEEENKLIPGQLLLVPVTCGCTGNRSFANITYEIKPGDSYYFVSTSAFENLTNWHVAREFNPGLNPVILPIGTKVVFPLFCRCPSRSHLAKGIKFLITYVWQPSDNVSVVGTMFNASEMDIRTENKYQNFNSAANLPVLIPVSELPDVSRFHSLPKRKGNNHRLLVIVGTILGCTCLTVLVTFLLVYVCCLRKKKISLKKSASFLETADKLLSGVSGYVSKPTMYEFNVIMEATMNLNQQCRIGGSVYKAKIDGQVLAVKKVKEDVMEELKILQKVNHANLVKLMGFSSDDNVGNCFLVYEYAENGSLDNWLYSMSASDSSSGSVSFLTWSQRICIALDVAMGLQYLHEHTQPRIVHRDIRTSNIVLDSSFKAKIANFSMARTSTNPMMLKTDVFAFGVVLLDLLTGKKSMMTNERGEVVMLWKDMRGIIDGEDEKKKEERLRRWMDPKLGSFYAIDDALSLVSLAVTCTADKPLSRPTMAEVVLSLSFLSQSCAGVKVEPWTSAGGLDAEVPQTISPIAAR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5175g00010 604 Pfam Protein tyrosine and serine/threonine kinase 342 466 IPR001245 GO:0004672|GO:0006468
Pral5175g00010 604 SMART tyrkin_6 319 569 IPR020635 GO:0004713|GO:0006468
Pral5175g00010 604 Gene3D Transferase(Phosphotransferase) domain 1 385 468 - -
Pral5175g00010 604 Gene3D Transferase(Phosphotransferase) domain 1 469 581 - -
Pral5175g00010 604 ProSiteProfiles Protein kinase domain profile. 287 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5175g00010 604 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 576 - -
Pral5175g00010 604 ProSitePatterns Tyrosine protein kinases specific active-site signature. 437 449 IPR008266 GO:0004672|GO:0006468
Pral5175g00010 604 Gene3D Phosphorylase Kinase; domain 1 295 384 - -
Pral5175g00010 604 SUPERFAMILY Protein kinase-like (PK-like) 326 572 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5175g00010 Pral-Chr5175 60557 62371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5175g00010 51 577 Receptor kinase-like Gene Family AT3G21630 29.281 2.60e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral5175g00010 PK_Tyr_Ser-Thr 8.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5175g00010 - - vra:106777834 723.776