Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5173g00011 ATGTTTCTTTCAACAGTAGCCATTCCCGCATTCCTCCTTCTGACATTCATTTACGTTCTTTCTATCTTCTTGCGTTGGAATAATCACAGTAAAGATGCTCGGAAACGTCCTCCAGGTCCTCTGGCTCTCCCCATTATTGGCAACATGCACTTGTTGGGCACACTTCCACATCGCAACCTTCAATCTCTGGCCAACAAATACGGACCCGTCATGTCCTTGTGGCTGGGGCAGGTCCAAGCCATTGTGGTTTCCTCTCCTGAAGCTGCTGAACTATTCCTTAAGACCCACGACCCTGCTTTCGCTAGCCGACCTCAAAATCAAGCCACTGATTACATTTTCTATGGCAGCCAGGGCATGGCTTTTTCTGAGTATGGCTCATACTGGCGCAACATGAAGAAACTGTGCACTTTACACCCTTTAAGTGCTTCAAAGCAAGAGTTGTTTGGTCCTCTTAGGAGGGAGGAGGTAAGAATGGTGGTCAAGTCAATGGGGAATGCTGCTACAGTGGGTGAAGTTGTGAATGTTACTGAGAAAGTGAATACGCTTCTTGAAGATATAGTTTATAAGATGATATTGGGACGAAATAGGGATGACCAGTTTGATTTGAAAGGCCTCGTTTCCAAGGCTATGAGATTGGGTGGAGCTTTTAATCTTGCAGATTTTGTGCCTACATTAGGAGCTTTTGATCTTCAGGGAATAACACGACAGTTGAAGGAAACCAGTGAAGCACTTGATGAAGTGTTGGAGAAAATATTGAAGGAGCATGAGCAAGCTTTTAATGAACGAAGAGGTAAGCAGAACGATGACTTGGTAGACATATTACTCTCACTGATGCACCAACCCTTGAATGATGATGAACAAAACTTTGTGATCACTCGTCACAACATCAAAGGTACTGCATTAGAGATCATTTTTGCTTCATTCGAAACCACGGCTTCGACCATCAATTGGGCTTTATCTGAACTCTTGAGAGATCCGAGGGTGATGAAGAAGTTGCAAGACGAGCTTGAAACTGTGGTAGGAATGGATAGAATGGTGGAAGAAGCTGACATATCAAAGTTGAACTATTTGGATATGGTGGTGAAGGAGACTTTAAGACTCTTTCCCGCGGGAATATTCATCCCTCGAAAATCAACACGGGATATTATGGTTGATGGTTACTACATACGGCAGAACACACGAATCATGGTGAATAATTGGGCAATAGGACGAGATGTTAAGACATGGACTGATGATGCCCACATGTTTTATCCAGAGAGGTTTTTGAATGGCAATGTTGACCTTCAAGGAAATCATTTTCAACTTATACCATTTGGGTCGGGTCGCAGAAAATGTCCTGGGATCCAATTGGGTCTGACTATAGTTAAAATGGTGATAGCCCAGCTGGTTCACTGTTTTAATTGGGAGCTACCTTGTGGGATGAAGCCTTGTGACATGGACATGACTGAAACATTTGGCTTCTCCATGACGAGAGCCAAGCCATTGTTGGCTGTGCCAACTCATCGTATACCCTCAAAAGTTTATGATGAATAA 1533 0.4357 MFLSTVAIPAFLLLTFIYVLSIFLRWNNHSKDARKRPPGPLALPIIGNMHLLGTLPHRNLQSLANKYGPVMSLWLGQVQAIVVSSPEAAELFLKTHDPAFASRPQNQATDYIFYGSQGMAFSEYGSYWRNMKKLCTLHPLSASKQELFGPLRREEVRMVVKSMGNAATVGEVVNVTEKVNTLLEDIVYKMILGRNRDDQFDLKGLVSKAMRLGGAFNLADFVPTLGAFDLQGITRQLKETSEALDEVLEKILKEHEQAFNERRGKQNDDLVDILLSLMHQPLNDDEQNFVITRHNIKGTALEIIFASFETTASTINWALSELLRDPRVMKKLQDELETVVGMDRMVEEADISKLNYLDMVVKETLRLFPAGIFIPRKSTRDIMVDGYYIRQNTRIMVNNWAIGRDVKTWTDDAHMFYPERFLNGNVDLQGNHFQLIPFGSGRRKCPGIQLGLTIVKMVIAQLVHCFNWELPCGMKPCDMDMTETFGFSMTRAKPLLAVPTHRIPSKVYDE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5173g00011 510 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 FunFam Cytochrome P450 83B1 23 498 - -
Pral5173g00011 510 Coils Coil 230 250 - -
Pral5173g00011 510 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Pral5173g00011 510 Pfam Cytochrome P450 37 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5173g00011 510 PANTHER CYTOCHROME P450 93A3-LIKE 14 503 - -
Pral5173g00011 510 CDD CYP71-like 66 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5173g00011 Pral-Chr5173 49299 51066 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5173g00011 3 508 Cytochrome P450 AT5G07990 38.178 3.01e-120 361