Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5173g00005 ATGATTTCAGGTCGGTGTGCAGCTTGTAAGAATCAAAGAAGAAAGTGTCCTTCCGATTGCATTTTCTCTCCCTATTTTCCTCCCAATGATCCTGAAAGATTTGCTTGTGTTCATAGAATATATGGTAGCAGTAACGTTGGAAAAATGCTTCAGCAGATCCCAGTGCACATGCGAGCACAAGCAGTGGATACCTTATATTTTGAAGCAAGATGCAGGATAGAAGATCCTGTGTATGGTTGCGTTAAGCTTATATCTCAGTTGCATCAGAACTTACATGATACAGAAAGCGAACTAGCCAGAGTTCAAGCTCTTATTGCATTCCACAAGCTTCAAATCACACAAGTTGAACTTCATCAACCCACCTTGGATGCATCACAGAGCAGCATCGAGCAGTTTCAGAATCCTTGGTTTATTAATTAG 420 0.4095 MISGRCAACKNQRRKCPSDCIFSPYFPPNDPERFACVHRIYGSSNVGKMLQQIPVHMRAQAVDTLYFEARCRIEDPVYGCVKLISQLHQNLHDTESELARVQALIAFHKLQITQVELHQPTLDASQSSIEQFQNPWFIN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5173g00005 139 Coils Coil 84 104 - -
Pral5173g00005 139 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 123 - -
Pral5173g00005 139 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Pral5173g00005 139 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5173g00005 Pral-Chr5173 32648 33336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5173g00005 1 116 AS2 family AT3G26660 58.621 8.27e-51 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5173g00005 LOB 7.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5173g00005 - - lang:109328513 186.808