Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5172g00004 ATGGATATCACTTGCGGAACATTGAGTAGTTTGGCTGACAAGTTCCGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTAAGGAACTCACCCTTGAGAGAAGCTCCAAACAACAGCAAATAGATAATGCTAGAAAAAATTTAGAACAAATTGAAGAGAAAGTTCAGCATTGGTTGCGCAAAGTAGATGAGATTTTAACGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTGACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGAAATGGCACAGCAAGTTGTTGAAATCTATGGGAAGAGAAACTTTGATAGGGTTGCATATCCTGTTCCTCCCCCATCGATGCCAGAATTACTCAACAGAAAAAGCAACGAACGGATTGGTTCTAGAACGCAAATTGTGAATCAAATTATGGAGCTCTTAGATAATCCTAGTGTTAATATTGTCGGATTGTGTGGGCTTGGCGGTGTTGGCAAGACCACTATAGCTAAAGAGGTGGCAGAGAAGGCGAAGAATCAAAACATGTTTAAAAAGGTGATCATGGCAACTGTTTCTAATGAATTGGACGTTGAGAAGATTCAAGGCCAGATTGCAGAGAAGCTGGGTTTTCAACTCAATGAAAAATTTGAAGTAAGAGCTTATCGTCTATGTGAAAGGTTGAAGCAAGAGGAGAATATGCTCCTAATATTGGATAATCTTTGGAAGGAACTTGATTTAGGCGAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTCTAGCAAAAAGAATGAACGCTGCAAAATTTTACTAACTTCAAGGAATAAGAGTTTGCTGTCAAATGGCATGAAATGTCAAAAAATTATCGAAGTGGACGTTTTGTCAAAGGATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTATTGACTCAAGCACTCCTGACAACTTGATATCTATAGCCTATCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAGCAGCTGCCAAGGCACTAAAGGGAAAAAATCTAGATGAGTGGCAAGATTTCTGTAAACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGTGATATTGAAGTCGAGTTATGATTGTCTAAGCTTAGAGAAAAAACGTATCTTCTTGCTCTCCGCCATGCTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTATGGGGTTAGATATTCTTGACGGCATAGAAGACATAGAAGATGCCCGCATTGGAGTCTCTGCTGCCGTAAGTAATCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTAGTCATTACTTTACAATACATGATGTCTTTCGAGATCTTGCAATATCGATTGCAACCGATGAATTAAATGCATTCATTGTGAGGCATGGAAGCTTGAAAGAATGGCCTGAAAAAAATAAGCTTGAAGACTACAAGGGAATTTGCTTGCAAAAGAGTGACATCAGTGACCTTCCAGAAGAGCTTCATGGTCCAAGATTAGAATTCTTTCTGCTAGACAGCACAAAACGTGATTTGGCCATACCTAGGATGTTTTTCAAATCATCAAAGAAGCTGAAAGTGTTGGCACTTACCAATGTGCATATTTCGTCACTAGCATCACTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTGCTAGGAAACATAATTGAGGTTGGAAGCTTGAAGAAGTTAGAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAGTTAACTTCTTTACAAATGTTGAATTTAGCCCATTGCTCCGAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGTTTTGCTTATGGGAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGA 2049 0.3914 MDITCGTLSSLADKFRDLVIDLTWEQLRYLFQYHRNIEELNERLKELTLERSSKQQQIDNARKNLEQIEEKVQHWLRKVDEILTQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAKEMAQQVVEIYGKRNFDRVAYPVPPPSMPELLNRKSNERIGSRTQIVNQIMELLDNPSVNIVGLCGLGGVGKTTIAKEVAEKAKNQNMFKKVIMATVSNELDVEKIQGQIAEKLGFQLNEKFEVRAYRLCERLKQEENMLLILDNLWKELDLGEVGIPFVDVGSSSKKNERCKILLTSRNKSLLSNGMKCQKIIEVDVLSKDEALELFKRISELPIDSSTPDNLISIAYQIVRKCHGLTLAIAAAAKALKGKNLDEWQDFCKRLNHPLRRNITGIKEVDVILKSSYDCLSLEKKRIFLLSAMLSHDPSIDDLLMYSMGLDILDGIEDIEDARIGVSAAVSNLKSLNLFLDSFSSHYFTIHDVFRDLAISIATDELNAFIVRHGSLKEWPEKNKLEDYKGICLQKSDISDLPEELHGPRLEFFLLDSTKRDLAIPRMFFKSSKKLKVLALTNVHISSLASLMFLQKLKTLCLHSCLLGNIIEVGSLKKLEVLSLAYSEIQQLPIELAELTSLQMLNLAHCSELKVIPPKLLSSFKKLGFCLWEIAFTSGKLKDLLKLMKTRVLTS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5172g00004 682 Gene3D - 317 408 IPR042197 -
Pral5172g00004 682 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 654 - -
Pral5172g00004 682 Coils Coil 30 85 - -
Pral5172g00004 682 SMART AAA_5 176 317 IPR003593 GO:0016887
Pral5172g00004 682 SUPERFAMILY L domain-like 458 659 - -
Pral5172g00004 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
Pral5172g00004 682 Gene3D Ribonuclease Inhibitor 478 680 IPR032675 -
Pral5172g00004 682 PRINTS Disease resistance protein signature 251 265 - -
Pral5172g00004 682 PRINTS Disease resistance protein signature 179 194 - -
Pral5172g00004 682 PRINTS Disease resistance protein signature 353 367 - -
Pral5172g00004 682 PRINTS Disease resistance protein signature 624 640 - -
Pral5172g00004 682 Gene3D - 147 316 IPR027417 -
Pral5172g00004 682 Pfam NB-ARC domain 162 405 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5172g00004 Pral-Chr5172 58936 60984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5172g00004 156 675 WRKY Transcription Factor Family AT5G45050 23.762 4.60e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5172g00004 - - pcin:129285257 720.694