Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5167g00006 ATGTTACACATAATGGGAAGACCTTCTTCCTTTGTTTTCCTCTTCTTACTCCATTCCTTCATGGCCTCCTTAGTTTGGAGTGATACAAATATCACTAGTGACAAATCTGCACTTCTTGCCTTTAAATCCTTTATCACTTCAGATCCACACAATTTCTTAGCTAATTGGTCTGTCTCTTTTTCTCCATGCAGCTGGATTGGTATCACATGCAATACTCGTCATGGAAGAGTCCACTCCTTGAATCTTGATGGCATGGATCTTAAGGGTACCATATCTCCACAACTAGGAAATCTCTCATTCCTTGTTGAACTTGACCTCAGTGACAACGATTTTCATGATCAAATACCAAATGAGCTAGTTAAATTGCGTAGGTTGGAACTACTCAATTTGAGCTGCAATGACTTTCATGGGCAAGTTCCAATAGGGATAGGAGGTTTATCTTCACTTGAGAAACTAAATCTTCGAAATAATAGTCTTAATGGAATTATTCCACCATCTCTATTCAATCTGACAATGTTAGAGACATTGGATTGGAATTTTAATTCCATTGAGGGGACCATTCTGCTTGAGGTGGGAAGACTTGAGAAATTGACCATTTTACGTCTTGCGGGTAACAAGCTTTCAGGAAACATTCCCCGAACAATTTCCAACTTGTCTTCACTTGAGTTATTGAGTTTGTCTTATAACACTTTGTCAGGGGGCATCCCAAGTGAGATTGGGGATCTTTCACAATTGAAGACATTGTATCTTGGAAATAATCAACTTGCTGGTTCAATACCATCTTCATTATTCAACAATTCAGTGCTGCAAGACTTTGAACTTGCAATAAATAATTTATCTGGCAGTCTCCCAATAAATGTGTGTGTTGGGCTTCCAAAGCTACAAATATTTTATGTGAATGGAAATGACTTGTCTGGCCAAATACCCTCCACTTGGCATCAATGCATAGAATTATTAGAGTTACAATTGTATGATAACAAATTCAACAGAGGAAACATACCAATTGACATTGGAAATCTGACCAAACTTCAGTGGCTATCTCTTTCCAACAGCAACTTGCAAGGAATCATTCCAAGTGAGATTGGAAATTTGACAAACCTCCAATTCCTTGGTCTTGGCGAGAACATTTTGCAAGGTTTTATACCCAAGGACATAGGCTGTCTTGTTAAACTTGAAATCATAGATTTGGGATCAAATTATTTGAGTGGACCTATTCCTTTCAGTATATTCACCATTTCAACATTGAAATACTTAAGCCTTGGCAGTAATTCCCTCTCTAGCCTTCTCCCATCATATTTAGGGATTGGCCTTCCCAACTTGGAGAATTTACTACTGGATGATAATGAGATAATTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTGAGTTAAATTTGTCATTGAATAAATTAAATGGATCTATACCCAATGTCATTGGAAATTTAAAAAACTTGTTCGACTTAGCTTTGGATGGGAATGATTTGACTGGGTTGATTCCAGACAGAGTTAGCAACTTACATAAACTTCAACGTTTAAGTCTCAGCAACAACAGATTGCAGGGTTCCATCATAAATGAACTTTGCCAACTCAAAAGTCTAAGTGAGTTGTATCTTGCCAACAACATGTTTTCGGGAGCATTACCAGGATGTCTCGGGAATACTTCTTTGCGGAAGTTGAATTTTAGCTCCAACAAATTGATGTCTCATATACCTTTTTCTTTCTGGAGTCTCAAAGATATCTTAGTTTTAGACATATCGTCCAATGCATTGAGTGGATCAATATCGCCAGAGTTATCAAACTTTAGAGCAATTATACTGTTGAACTTGTCAAGAAACCAGATTTCAGGAAGCATCCCTACAACTATGGGTGGCTTGCAAACCTTGATAACTCTATCTTTGGCTAACAACAAATTACAAGGGTCTATTCCTCAATCATTTAGTAGCATGATAAGCATAGAGTCCATGGACCTTTCCCATAATTATTTATCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCAATCTTAAATACATTAATCTTTCTTACAATTTGTTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAAATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAGAGGAAACAAACACAAATCAAACAAAGTGATGGTGGTGATAAAATGCTCAGTGCCTATCATGGTTGTCATTTTGGTCGTTACAAGCATTATCTTTCTAAAGCATAACAGAGACGATGCTGACTATGCAACCAAAAGGGATTTAACCAATTTGGATGCACCAACTAGGATATCCTATTATGAGCTTTTACAGGGAACAAATAGATTTGATGAAAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATATAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTATTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGCAGCTATGTGCAATTTACGCCACCGTAATCTCATTAAGATCATTAGTTGTTGCTCGAATGATGATTTCAAGTCTCTAATAATGGAATTCATGTCAACTGGAAGCCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCCTACAAAGGTTGAATATAATGGTTGATGTGGCAACTGCATTAGAGTATCTTCATCATGGTATTTCTACTCCAATTGTTCATTGTGACATAAAACCAAGTAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATGGCTAAACTATTAGGTGAAGGACAATTGGAAACTCGTACAAAAACATTAGCTACAGTTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATATTTACAAGGAAGAAGCCAACTGATGAAATGTTTGAGGAAGATCTTGGTTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATCATCAATATTCTAGATGTCAATTTGCTACCTAAAGGGAATTCAAATATCAACAATATATTAGCACATATATCATCAATTTTTGAGTTGGCATTAAGTTGTTGCACTGAATTACCTGAAGCACGAATTATGATGACTGATGTTGTCGTCTCATTGAAAAAGATAAGGTCATATTTATGTAAGATGTTAGAGATGCAACACTAG 3246 0.3638 MLHIMGRPSSFVFLFLLHSFMASLVWSDTNITSDKSALLAFKSFITSDPHNFLANWSVSFSPCSWIGITCNTRHGRVHSLNLDGMDLKGTISPQLGNLSFLVELDLSDNDFHDQIPNELVKLRRLELLNLSCNDFHGQVPIGIGGLSSLEKLNLRNNSLNGIIPPSLFNLTMLETLDWNFNSIEGTILLEVGRLEKLTILRLAGNKLSGNIPRTISNLSSLELLSLSYNTLSGGIPSEIGDLSQLKTLYLGNNQLAGSIPSSLFNNSVLQDFELAINNLSGSLPINVCVGLPKLQIFYVNGNDLSGQIPSTWHQCIELLELQLYDNKFNRGNIPIDIGNLTKLQWLSLSNSNLQGIIPSEIGNLTNLQFLGLGENILQGFIPKDIGCLVKLEIIDLGSNYLSGPIPFSIFTISTLKYLSLGSNSLSSLLPSYLGIGLPNLENLLLDDNEIIGQIPNSISNASKLIELNLSLNKLNGSIPNVIGNLKNLFDLALDGNDLTGLIPDRVSNLHKLQRLSLSNNRLQGSIINELCQLKSLSELYLANNMFSGALPGCLGNTSLRKLNFSSNKLMSHIPFSFWSLKDILVLDISSNALSGSISPELSNFRAIILLNLSRNQISGSIPTTMGGLQTLITLSLANNKLQGSIPQSFSSMISIESMDLSHNYLSGVIPKSLESLLNLKYINLSYNLLDGEIPNGGPFQNFTAQSFMMNKNLCGKSQLQVQPCRRGNKHKSNKVMVVIKCSVPIMVVILVVTSIIFLKHNRDDADYATKRDLTNLDAPTRISYYELLQGTNRFDESNLLGSGSFGSVYKAILPNEKIVAVKVFNIDMEEALRSFDIECAAMCNLRHRNLIKIISCCSNDDFKSLIMEFMSTGSLDRWLYSHNYCLDILQRLNIMVDVATALEYLHHGISTPIVHCDIKPSNVLLDEDMVAHLSDFGMAKLLGEGQLETRTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIMLMEIFTRKKPTDEMFEEDLGLKDWVSKSTPHSIINILDVNLLPKGNSNINNILAHISSIFELALSCCTELPEARIMMTDVVVSLKKIRSYLCKMLEMQH 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5167g00006 1081 ProSiteProfiles Protein kinase domain profile. 794 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00006 1081 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 334 429 - -
Pral5167g00006 1081 SUPERFAMILY L domain-like 290 488 - -
Pral5167g00006 1081 SMART LRR_sd22_2 242 274 - -
Pral5167g00006 1081 SMART LRR_sd22_2 509 532 - -
Pral5167g00006 1081 SMART LRR_sd22_2 437 463 - -
Pral5167g00006 1081 SMART LRR_sd22_2 194 220 - -
Pral5167g00006 1081 SMART LRR_sd22_2 388 420 - -
Pral5167g00006 1081 SMART serkin_6 794 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00006 1081 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pral5167g00006 1081 PANTHER OS04G0122200 PROTEIN 231 329 - -
Pral5167g00006 1081 Gene3D Phosphorylase Kinase; domain 1 758 869 - -
Pral5167g00006 1081 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 189 287 - -
Pral5167g00006 1081 ProSitePatterns Protein kinases ATP-binding region signature. 800 822 IPR017441 GO:0005524
Pral5167g00006 1081 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 435 728 - -
Pral5167g00006 1081 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Pral5167g00006 1081 SUPERFAMILY L domain-like 459 716 - -
Pral5167g00006 1081 Pfam Leucine rich repeat 631 689 IPR001611 GO:0005515
Pral5167g00006 1081 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Pral5167g00006 1081 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Pral5167g00006 1081 Gene3D Ribonuclease Inhibitor 385 725 IPR032675 -
Pral5167g00006 1081 Gene3D Ribonuclease Inhibitor 289 384 IPR032675 -
Pral5167g00006 1081 SUPERFAMILY Protein kinase-like (PK-like) 775 1066 IPR011009 -
Pral5167g00006 1081 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515
Pral5167g00006 1081 SMART LRR_typ_2 340 364 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 242 266 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 437 461 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 676 700 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 509 532 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 146 170 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 652 675 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 628 651 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 98 122 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 533 556 IPR003591 -
Pral5167g00006 1081 SMART LRR_typ_2 194 218 IPR003591 -
Pral5167g00006 1081 Gene3D Ribonuclease Inhibitor 186 288 IPR032675 -
Pral5167g00006 1081 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Pral5167g00006 1081 Pfam Protein kinase domain 795 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00006 1081 Gene3D Transferase(Phosphotransferase) domain 1 870 1078 - -
Pral5167g00006 1081 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 870 1079 - -
Pral5167g00006 1081 SUPERFAMILY L domain-like 31 329 - -
Pral5167g00006 1081 FunFam Serine-threonine protein kinase plant-type 774 869 - -
Pral5167g00006 1081 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 31 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5167g00006 Pral-Chr5167 389116 411129 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5167g00006 10 1070 Receptor kinase-like Gene Family AT5G46330 34.138 1.25e-178 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5167g00006 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5167g00006 - K13420 pcin:129285519 1077.39