Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5167g00005 ATGGGTGGGTTGCAAACTTTGCAAAACCTATCCTTGGCTCACAACAAATTACAAGGGTCTATACCTGAATCACTAAGTGGCATGATAAGTATTGAGTCAATAGATTTTTCCCATAATTACTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCATTGCACTATCTTAAATCTATTAATCTTTCCTACAATTTATTGGAAGGAGAAATTCCAAGTGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGAGAACCTCAACTACAAATAAAACCATGTAGGAGAGGAAACAATCACAAATCAAATAAAGTGATGCTAGTTGTAAAATGCTCAGTGCCAATCATGGTTGTCATTTTGGTTGTTACATGCATTGTCTTTCTAAAGCATGATAGAGACAATGCTAATTATGCAACCAAAAGGAATTTAACAAATTTCGATGGACCAACTAGGATATCCTATCATGAGCTTTTACAGGGAACAAATGGATTTGATGAGAGGAATCTTCTTGGCTTTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTTAAAGTGTTTAACATAGACATGGAACAAGCATTGAGAAGTTTTGATATTGAATGTGCTGCTATGTGCAATTTATGCCACCGTAATCTCAGTAAGATCATTAGTAGTTGCTCAAATGATGATTTCAAGTCTCTAATTATGGAATTCATGCCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCTTGCAGAGGTTGAATATAATGGTTGATGTGGCAGCTGCATTAGAGTATCCTCATCATAGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGAAATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGGTGAAGGACAGTTGGAAACTTATACAAAAACATTAGCTACAGTTGGCTATATGGCACCAGAGTATGGCTCAAAAGGAGTAGTTTCTTTCAAAGGAGATGTGTATAGCTATGGCATCATGCTAATGGAGATGTTTGCAAGGAAGAAGCCAACTGATAAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGCAAATCAATACCGTATTCAATCATCGATATTCTTGATGTCAATTTGCTGCATGAAGGGAATCCAAATATTAGCAATATATTACCACATATATCATCAATTTTTGAGTTAGCATTAAGTTGTTGCACTGAATCACCAGAAGCACGAATTACGATGACTGATGTTGGGGGGAAGAGGAAGCCGACGCTGTTGCTGGGCTCTCTTCTGGAGGCCGGCGATGGTCTTCGAAAGAGGAGGAGAGTCGCGCCGACAGAGGAGGCGGAGGAGCTCGTTTTCTTCGACTGGCTTAAGGGAGACGGAGACTCAAAGAGATTCAGACGGAGATTGAAGGACAAGAGGGCTGGATTGAGCACGCCGTTTCTGTCTGTGTTCTTCTTCTTAAATCTTTAG 1539 0.3814 MGGLQTLQNLSLAHNKLQGSIPESLSGMISIESIDFSHNYLSGVIPKSLESLHYLKSINLSYNLLEGEIPSGGPFQNFTAQSFMMNKDLCGEPQLQIKPCRRGNNHKSNKVMLVVKCSVPIMVVILVVTCIVFLKHDRDNANYATKRNLTNFDGPTRISYHELLQGTNGFDERNLLGFGSFGSVYKAILPNEKIVAVKVFNIDMEQALRSFDIECAAMCNLCHRNLSKIISSCSNDDFKSLIMEFMPNGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYPHHSTSTPIVHCDIKPSNVLLDEEMVAHLSDFGIAKLLGEGQLETYTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIMLMEMFARKKPTDKMFVEGLDLKDWVSKSIPYSIIDILDVNLLHEGNPNISNILPHISSIFELALSCCTESPEARITMTDVGGKRKPTLLLGSLLEAGDGLRKRRRVAPTEEAEELVFFDWLKGDGDSKRFRRRLKDKRAGLSTPFLSVFFFLNL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5167g00005 512 Gene3D Phosphorylase Kinase; domain 1 133 245 - -
Pral5167g00005 512 SUPERFAMILY L domain-like 2 93 - -
Pral5167g00005 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Pral5167g00005 512 SMART serkin_6 170 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00005 512 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Pral5167g00005 512 Gene3D Transferase(Phosphotransferase) domain 1 246 445 - -
Pral5167g00005 512 FunFam Leucine-rich repeat receptor-like protein kinase 6 101 - -
Pral5167g00005 512 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 246 443 - -
Pral5167g00005 512 Pfam Leucine rich repeat 6 65 IPR001611 GO:0005515
Pral5167g00005 512 ProSiteProfiles Protein kinase domain profile. 170 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00005 512 PANTHER OS04G0122200 PROTEIN 4 440 - -
Pral5167g00005 512 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Pral5167g00005 512 SUPERFAMILY Protein kinase-like (PK-like) 150 438 IPR011009 -
Pral5167g00005 512 Pfam Protein kinase domain 172 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5167g00005 Pral-Chr5167 292124 307177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5167g00005 7 71 Receptor kinase-like Gene Family AT3G47570 41.538 5.20e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5167g00005 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5167g00005 - K13420 pcin:129285519 653.669