Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5167g00004 ATGCTCATTCAATTAGATTTGTCATTGAATAAATTAAATGGAGCTATACCCGATGTCATTGGAAATTTAAAAAACTTGCTTGACTTAGCTTTGCATGGGAATGATTTGATTGGGTTGATTCCAGACACAGTTAGCAACTTACATAACCTTCAAAGTTTAATTCTCAACAACAACAGATTGCAAGGTTCCATTATAAATGAACTTTGCCAACTCAAGAATCTAAGTAAGCTGAATCTTGCCAACAACATGTTTTCGGGAGCAATTCCGAAATGTCTTGGGAATACTTCTTTGCAACAGTTGGATTTTAGCTCTAATATATTGATTTCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATTTTGGTTTTAGACATATCTTCCAATGCATTGAGTGGAATAATTTCACCGGAGGTATCAAACTTGAGAGCAATCACACTATTGAATTTGTCAAGGAACCAAATTTCAGGAAGCATCCCTACAACTATGGGTGGGTTGATAACTTTGCAAAGCCTATCTTTGGCTCACAACAAATTACAAGGGTCTATACCTGGATCACTAAGAGGCATGATAAGTATTGAGTCAATAGATCTATCTCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCACTACTCTATCTTAAATCTATTAATCTTTCCTACAATTTATTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTCACTGCTCAATCTTTTATGATGAACAAAGGCCTTTGTGGAAAATCCCAACTACAAGTCCAACCATGTAGGAGAGGAAACAAGCACATATCAAACAAAGTGATGCTGGTGATAAAATGCTTAGTGCCTATCATGGTTGTCATTTTGGTTGTTATAGGCATTGTCTTTCTAAAACATAATAGAGATGACGGTAACTATGCAACCAAAAGGGATTTAACAAATTTGGGTGCACCAACTAGGATATCCTATTATGAGCTTCTACATGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTTTTTAACATAGACATGGAAGAAGCATTAAGAAGTTTTGATATTGAATGTCTTGCCCTATGCAATTTACGCCACCGGAATCTCGTTAAGATTATTAGTTGTTGCTCAAATGATGCTTTCAAGTCTCTAGTCATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTCTAGATATCCTTCAAAGGTTGAATATAATGGTTGATGTTGCAGCTGCATTAGAGTATCTTCATCATGGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATGTTAGTGATTTTGGTGTAGCTAAACTATTAGGTGAAGGACAACTTGAAATATATACAAAAACATTGGCTACAGTTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACTGATGAAATGTTTGTTGAAGGTCTTGATTTGAAAGATTGGGTTAGCAAATCAACACCACATTCAATTATCAATATTCTAGATGCCAATTTGCTACATAAAGGGAATCCAAATATCAGCAATATATTGCCACATATATCATCAATTTTTGAGTTGGCATTAAGTTGTTGCACTAAAGTACCTGAAGCACGAATTATGATGACTGATGTTGTGGTCTCATTGAAAAAGATAAGGTCATATTTACGTAAAATGTTAGGAAGGCGCCACTAG 1860 0.3559 MLIQLDLSLNKLNGAIPDVIGNLKNLLDLALHGNDLIGLIPDTVSNLHNLQSLILNNNRLQGSIINELCQLKNLSKLNLANNMFSGAIPKCLGNTSLQQLDFSSNILISHIPSSLWSLKDILVLDISSNALSGIISPEVSNLRAITLLNLSRNQISGSIPTTMGGLITLQSLSLAHNKLQGSIPGSLRGMISIESIDLSHNYLSGVIPKSLESLLYLKSINLSYNLLDGEIPNGGPFQNFTAQSFMMNKGLCGKSQLQVQPCRRGNKHISNKVMLVIKCLVPIMVVILVVIGIVFLKHNRDDGNYATKRDLTNLGAPTRISYYELLHGTNGFDESNLLGSGSFGSVYKAILPNEKIVAVKVFNIDMEEALRSFDIECLALCNLRHRNLVKIISCCSNDAFKSLVMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGTSTPIVHCDIKPSNVLLDEDMVAHVSDFGVAKLLGEGQLEIYTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIMLMEMFTRKKPTDEMFVEGLDLKDWVSKSTPHSIINILDANLLHKGNPNISNILPHISSIFELALSCCTKVPEARIMMTDVVVSLKKIRSYLRKMLGRRH 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5167g00004 619 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 616 - -
Pral5167g00004 619 PANTHER OS04G0122200 PROTEIN 7 609 - -
Pral5167g00004 619 FunFam Serine-threonine protein kinase plant-type 312 407 - -
Pral5167g00004 619 ProSiteProfiles Protein kinase domain profile. 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00004 619 Pfam Protein kinase domain 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00004 619 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Pral5167g00004 619 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Pral5167g00004 619 SUPERFAMILY Protein kinase-like (PK-like) 311 604 IPR011009 -
Pral5167g00004 619 SUPERFAMILY L domain-like 2 254 - -
Pral5167g00004 619 Gene3D Ribonuclease Inhibitor 1 270 IPR032675 -
Pral5167g00004 619 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 91 - -
Pral5167g00004 619 Pfam Leucine rich repeat 168 227 IPR001611 GO:0005515
Pral5167g00004 619 SMART serkin_6 332 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5167g00004 619 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Pral5167g00004 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Pral5167g00004 619 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 136 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5167g00004 Pral-Chr5167 167393 169778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5167g00004 2 613 Receptor kinase-like Gene Family AT3G47570 40.620 2.27e-137 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5167g00004 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5167g00004 - K13420 pcin:129285519 910.212