Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5166g00012 ATGGGAAAACCTTCCTCCTTTGTCTTCCTCATCATCTTGCTTCTTTGCTTGACAGTCACCTTAGCTTCCATTCATACAAACATCAATACTGACAAATTTGCACTTCTTAATCTTAAGTCCTTTATCACCTCTGATCCATATGATTTTTTAGTTAATTGGTCTGTCTCTTCTAGTCCATGCAGCTGGGCTGGTATCACATGCAATAATCGGCATGGAAGGGTCCATTCTGTGAATCTTAGCAGCATGGAACTTAAGGGCACCATATCTCCACAACTAGGAAATCTCTCATTCCTTGTTGAACTTGATCTCAATGAAAACAACTTTCATGGTCAGATCCCACAAGACTTGGTTCGATTACGTCGATTGAGACTACTCAATTTGAGCTATAATGACTTTCATGGACAAGTTCCAACATGGATAGGAGATTTAACTATGCTTGAGCACTTAAGTTTTCAAAATAACAGTCTCAACGGATTTATTCCATTATCTCTGTTCAATCTATCAAGTCTAAAGCACTTGAAGAAGTTACAACTTTCAAGGAACAAACTTTCAGGAGCAATTCCCCAAACAGTTTCCAACTTGTCTTCGCTTGAGTTGCTTTGGTTGTCTCATAATAATTTGTCAGGGAGCATCCCAAATGAGATTGGGGATCTTTCACAACTGAAGAAATTGTATCTTGGAAATAATGAACTTGCGGGTTCTATACCATCTTCATTATTTAACAGTTCAATGCTACAAGACTTCCAACTTGGAGTAAATAACTTATCTGGAAGTCTCCCAACAAATGTGTGTGTTGGGCTTCCAAAGCTACAAATATTTTTTGTAGATGGAAATGATTTGTCTGGCAAAATACCCTCCACTTGGCATCAATGCACAGAATTATTAAAATTACAATTGGGGTATAACAAATTCAACGGAGGAAACATACCAATTAACATCGGAAATCTGACCAACATCCAGAGGCTATATCTTTCCGACAGCAACTTGCAAGGTAAGATCCTTGATGTTCACAGCAATCAATTAGAGGGAAGCATTTCACAATCAATAAGCAACTGCACATCTTTAAAAGGATTATTTTTGGATATTAACTCATTTACAGGTTTTATACCCAAGGACATAGGCAGTCTTGTTAAACTTGAAGTCTTAGATTTGGGATCAAATCATTTGAGCGGACCTATTCCTTTCAGTGTATTCTCCATTTCAACATTGAAACACTTACACCTTGGCAATAACTCCCTCTCTGGTGTTCTCCCATCATATTTAGGGATTGGCCTTCCCAACTTGGAGCAATTACTACTGTCTCAAAATGAGCTGATTGGACAAATTCCAAACACCATATCAAATGTTTCTAAGCTCATTAGGTTAGATTTATCATTGAATAAATTTAACGGAGCTATACCCAATGTCATTGGAAATTTAACAAACTTGTTTGACTTAACTTTGAATGGGAATGATTTGAATGGGTTGATTCCAAACACAATCAGAAACTTACATAAGCTTCAACGTTTAAGTCTCAGCAACAACAGATTGCAAGGTGCCATTATAGATGAACTTTGCTTGCTCAAAAGTCTAAGTGAGTTGGATCTTGCTAACAACATGTTTTCAGGAGTGGTTCCCAGATGTCTCGGGAATACTTCTTTGCGAAACTTGAATTTTAGCTTCAACAAATTGATTTCTCATATGCCCTATTCTCTTTGGAGTCTTAAAGATATTTTGATTTTAGACATATCCTCCAATGCATTGAGTGGATCAATTTCACCAGAGGTATCAAACTTGGGAGCAATTATACTATTGAACTTGTCAAGAAACCAAATTTCAAGAAGCATTCCTGCAACTATGGGTGGTTTGCAAAACTTGCTAACCCTCTCTTTGGCTCACAACAAATTACAAGGGTCTATTCCTAAATCATTTAGCAGCATGATAAGCATAGAGTCTATGGATCTTTCCCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATTTATTGGATGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTACGATGAATAAAGACCTCTGTGGAAAACCCCAACTACAAGTCCAACCATGTAGGAGAGGAAACAAGCACATATTAAATAAAGTGATACTGGTTATAAAATGCTTAGTACCTATCATGGTTGTCATTTTGGTTGTTATAGGAATTGTCTTTCTAAAGCATAACAGAGATGATGCTAACTATGCAACGCGAAGGGATTTAACAAATTTGGATGCACCACCTAGGATATCTTATTATGAGCTTCTACAGGGAACAAATGGATATGATGAAAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAGTTCTAAATGAAAAGATTGTTGCTGTCAAAGTATTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTACTGCCATGTGCAATTTACGCCACCGTAATCTCATCAAGATTATTAGTAGTTGCTCAAATGATCATTTCAAGTCTCTAATCATGGAATTCATGTCCAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTATTTAGATATCCTACAAAGATTGAATATAATGGTTGATGTGGCAGTTGCATTAGAGTATCTTCAACATGGTACTTCTACTCCGATTGTTCATTGTGACATAAAACCAAGTAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGGTGAAGGACAATTGGAAACTTACACAAAAACAATGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGCGGTTTCTTTCAAGGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATGTTTACAAGGAAGAAGCCAACTGATGAACTGTTTGTTGAAGGTCTTGGTTTGAAAGAGTGGGTTAGCAAATCAACACCACATTCAATTATCAATATTCTAGATGTCAATTTGCTACGTGAAGGGGATCCAAATATCAACAATATATTACCACAAATATCATCAATTTTTGAGTTGGCATTAAGTTGTTGTACTGAATTACCTGAGGCACGAATTATGATGACAGATGTTGTGGTCTCATTGAAAAAGATAAGAAAGCTCCTATTGAGCTTGTCAAGAGTCTCACAAGAGGTAGTTGTGAGCAAAGATGTTTGCATGGTGTAA 3240 0.3648 MGKPSSFVFLIILLLCLTVTLASIHTNINTDKFALLNLKSFITSDPYDFLVNWSVSSSPCSWAGITCNNRHGRVHSVNLSSMELKGTISPQLGNLSFLVELDLNENNFHGQIPQDLVRLRRLRLLNLSYNDFHGQVPTWIGDLTMLEHLSFQNNSLNGFIPLSLFNLSSLKHLKKLQLSRNKLSGAIPQTVSNLSSLELLWLSHNNLSGSIPNEIGDLSQLKKLYLGNNELAGSIPSSLFNSSMLQDFQLGVNNLSGSLPTNVCVGLPKLQIFFVDGNDLSGKIPSTWHQCTELLKLQLGYNKFNGGNIPINIGNLTNIQRLYLSDSNLQGKILDVHSNQLEGSISQSISNCTSLKGLFLDINSFTGFIPKDIGSLVKLEVLDLGSNHLSGPIPFSVFSISTLKHLHLGNNSLSGVLPSYLGIGLPNLEQLLLSQNELIGQIPNTISNVSKLIRLDLSLNKFNGAIPNVIGNLTNLFDLTLNGNDLNGLIPNTIRNLHKLQRLSLSNNRLQGAIIDELCLLKSLSELDLANNMFSGVVPRCLGNTSLRNLNFSFNKLISHMPYSLWSLKDILILDISSNALSGSISPEVSNLGAIILLNLSRNQISRSIPATMGGLQNLLTLSLAHNKLQGSIPKSFSSMISIESMDLSHNYLSGVIPKSLESLLYLKYINLSYNLLDGEIPNGGPFQNFTAQSFTMNKDLCGKPQLQVQPCRRGNKHILNKVILVIKCLVPIMVVILVVIGIVFLKHNRDDANYATRRDLTNLDAPPRISYYELLQGTNGYDESNLLGSGSFGSVYKAVLNEKIVAVKVFNIDMEEALRSFDIECTAMCNLRHRNLIKIISSCSNDHFKSLIMEFMSNGSLDRWLYSHNYYLDILQRLNIMVDVAVALEYLQHGTSTPIVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQLETYTKTMATIGYMAPEYGSKGAVSFKGDVYSYGIMLMEMFTRKKPTDELFVEGLGLKEWVSKSTPHSIINILDVNLLREGDPNINNILPQISSIFELALSCCTELPEARIMMTDVVVSLKKIRKLLLSLSRVSQEVVVSKDVCMV 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5166g00012 1079 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Pral5166g00012 1079 Pfam Leucine rich repeat 598 653 IPR001611 GO:0005515
Pral5166g00012 1079 ProSiteProfiles Protein kinase domain profile. 782 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00012 1079 Gene3D Ribonuclease Inhibitor 336 713 IPR032675 -
Pral5166g00012 1079 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Pral5166g00012 1079 Pfam Leucine Rich Repeat 403 421 IPR001611 GO:0005515
Pral5166g00012 1079 SMART serkin_6 782 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00012 1079 SMART LRR_sd22_2 143 164 - -
Pral5166g00012 1079 SMART LRR_sd22_2 616 645 - -
Pral5166g00012 1079 SMART LRR_sd22_2 376 397 - -
Pral5166g00012 1079 SMART LRR_sd22_2 170 196 - -
Pral5166g00012 1079 SMART LRR_sd22_2 521 552 - -
Pral5166g00012 1079 SMART LRR_sd22_2 218 241 - -
Pral5166g00012 1079 SMART LRR_sd22_2 425 451 - -
Pral5166g00012 1079 SMART LRR_sd22_2 497 520 - -
Pral5166g00012 1079 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 857 1065 - -
Pral5166g00012 1079 SUPERFAMILY RNI-like 334 684 - -
Pral5166g00012 1079 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 334 417 - -
Pral5166g00012 1079 SUPERFAMILY Protein kinase-like (PK-like) 762 1053 IPR011009 -
Pral5166g00012 1079 Gene3D Phosphorylase Kinase; domain 1 765 856 - -
Pral5166g00012 1079 PANTHER LEUCINE RICH REPEAT KINASE 2 401 1057 - -
Pral5166g00012 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 900 912 IPR008271 GO:0004672|GO:0006468
Pral5166g00012 1079 Gene3D Transferase(Phosphotransferase) domain 1 857 1070 - -
Pral5166g00012 1079 Gene3D Ribonuclease Inhibitor 28 170 IPR032675 -
Pral5166g00012 1079 Gene3D Ribonuclease Inhibitor 265 335 IPR032675 -
Pral5166g00012 1079 Gene3D Ribonuclease Inhibitor 171 264 IPR032675 -
Pral5166g00012 1079 ProSitePatterns Protein kinases ATP-binding region signature. 788 809 IPR017441 GO:0005524
Pral5166g00012 1079 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 427 716 - -
Pral5166g00012 1079 SMART LRR_typ_2 592 615 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 95 119 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 218 242 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 497 520 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 170 193 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 143 167 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 376 400 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 640 663 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 473 496 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 521 544 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 616 639 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 425 449 IPR003591 -
Pral5166g00012 1079 SMART LRR_typ_2 194 217 IPR003591 -
Pral5166g00012 1079 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pral5166g00012 1079 SUPERFAMILY RNI-like 76 366 - -
Pral5166g00012 1079 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 171 333 - -
Pral5166g00012 1079 Pfam Protein kinase domain 782 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00012 1079 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 28 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5166g00012 Pral-Chr5166 170721 199986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5166g00012 495 681 Receptor kinase-like Gene Family AT3G47570 33.511 4.41e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5166g00012 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5166g00012 - K13420 pcin:129285519 1079.32