Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5166g00011 ATGCCCTCCATTTGGCATCAATGCAAGGAATTGGCAGACTTGAGGTTCGGGGATAACAAATTCAATCCAGGAACCGTTCCAAGTGAGTTTGGAAATTTGACCAAACTTCAGTGGCTATATCTTGGCAGACGCAACTTGAAAGGTTATATACCCAAGGATATAGGCAATCTTGTTAATCTTGAAATCTTAGATTTGGGAACAAACTGTTTGACTGGACATATTCCTTCCAATATATTCAACATTTCAACATTGGCATTATTAGCCCTGGGAGATAATTTCCTCTTCGGCCTTCTCCCATCATATTTAGGATTAGGTCTTCCCAACCTACAAGAGTTACGATTGAATGGGAATGAGTTAACTGGACAAATTTCAAACAGCATATCAAATGCTTCTAAGCTCATTAAGTTAGATTTGTCATCCAATAAATTTAGCGGAGCTATACCCATTGCAGTCGAACACTTAACAAACTTGATAAAAGTAGATTTGGATGAGAATCATTTGATAGGGTTGATTCCAAACACAATTAATAGATTACATAACCTTCAATGGTTAAGTCTAAGTAACAACAGATTGCAAGGGTTCATTATAAAAGAACTTTGCCATCTTAATCTTTTGAGTGAGTTGAATCTTGCCAACAACATGTTTTTGGGAGCAATTCCGGGATGTCTTGATAATACTTCTCTGCGGAAGTTGAATTTTAGCTTTAACAAATTGATTTCTCATATACCCTCTTCTCTTTGGAATCTCAAAGATATTTTGGTTTTAGATATATCTTCCAATGCACTGAATGGAGCAATTTCATCAAAGGTATCAAACTTGAGAGCAATTACACTATTGAATTTGTCAAGAAACCAAATTTCAGGAAGCATCCCTACAGCTATGGGTGGGTTGATAACTTTGCAAAACCTATCCTTGGGTCACAACAAATTACATGGGCATATACCTGGATCGCTAAGTGGCATGATAAGTATTGAGTCAATAGATCTTTCTCATAATTATTTGTCTGGTATGATTCCAAAGTCCTTAGAGTCACTTCTCTATCTTAAATCTATTAATCTTTCCTACAATCTTTTGGATGGAGAAATTCCAAGTGGTGGTCCTTTTCAAAATTTTATTGCTAAATCTTTTATGATGAATAAAGATCTTTGTGGAGAACCTCAACTACAAGTAAAACCATGTAGGAGAGGAAACAAGCACAAATCAAATAAAGTGATGCTGGTTGTAAAATGCTTAGTGCCTGTCATGGTTGTCATTTTGGTTGTTACAGGCATTGTCTTTCTAAAGCATAGTAGAGATAATGCTAACTATTCAACCAAAAAGGATTTAACCAATTTGGCTGCACCAACTAGGATATCCTATTATGAGCTTCTACAGGGAACAAGTGGATTTGATGAGAGCAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAATTCTTCCAAATAAAAAGACAGTTGCTGTCAAAGTATTTAACACAGACATGGAAGAAGCATTGAGATGCTTTGATATTGAATGCGCTGCCATGTCCAATTTACACCACCGCAATCTCATTAAGATTATTAGTAGTTGCTCAAACGATGATTTCAAGTCTCTAATCATGGAATTCATGTCAAATGGAAGCCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCTTGCAAAGGTTGAATATAATGGTTGATGTGGCAGCTGCATTAGAGTATCTTCATCATGGTACTTCTACTCCAATTGTCCACTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTGGGTGAAGGACAATTGGAAACTTGTACAAAAACATTGGCGACAATTGGCTATATGGCACCAGAGTATGGATCAAATGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAGATGTTTACGAGGAAGAAGCCAACTGATGAAATGTTTGTTGAAGGTTTTGGTTTGAAAGATTGGGTTAGTAAATCAATGCCACATTCAATTATCAATATTCTAGATGTCAATTTGCTGCAGAAAGGGAATCCAAATATCAGCAACATATTATCCCTTATGTCATCAATTTTTGAGCTGGCATTAAATTGTTGCATTGAATTACCTGAAACACGAATTATGATGACTGATGTTGTGGTCTCATTGAGAAAGACAAGGGTTTACCCTTGCGCGAGCCTGTTTCTCTTCGCGAGTGGGAGCGGCTTTTTCGACGCCGCTCTCCGGCAAAATGGTGCAGGGTCTAGATTTCTCATTATGTTTGTTGTCCTGGAGGTCTTTTTTGGCTTTCAGCAACACTCTTCCTCTCTTGGTTCAAGGAAGTGGTTTAAAGCCACCATAGTGGATGCAGATTGGCGTCAAAGAAGGTGGGCTCGATTGTTGAGAAAGTCTTTGGGACTACCACCTTCTACAGCCGTTCTTACTGTACCTATCGCCTCGACAAACAGGGTCCTTCGCTGCGGCAAGCCCTATTTTCCCCGCGACGAGGCGATAACTCGCTGGGGCGATAATAGCAAGTGCATTGCAGTGGCAGCGCCATTCTTCGTCTTGGCAACACTTACAGATCGCGACAAATCAAGGAAAGGTCCAGAATTCCAAGTATAA 2661 0.3856 MPSIWHQCKELADLRFGDNKFNPGTVPSEFGNLTKLQWLYLGRRNLKGYIPKDIGNLVNLEILDLGTNCLTGHIPSNIFNISTLALLALGDNFLFGLLPSYLGLGLPNLQELRLNGNELTGQISNSISNASKLIKLDLSSNKFSGAIPIAVEHLTNLIKVDLDENHLIGLIPNTINRLHNLQWLSLSNNRLQGFIIKELCHLNLLSELNLANNMFLGAIPGCLDNTSLRKLNFSFNKLISHIPSSLWNLKDILVLDISSNALNGAISSKVSNLRAITLLNLSRNQISGSIPTAMGGLITLQNLSLGHNKLHGHIPGSLSGMISIESIDLSHNYLSGMIPKSLESLLYLKSINLSYNLLDGEIPSGGPFQNFIAKSFMMNKDLCGEPQLQVKPCRRGNKHKSNKVMLVVKCLVPVMVVILVVTGIVFLKHSRDNANYSTKKDLTNLAAPTRISYYELLQGTSGFDESNLLGSGSFGSVYKAILPNKKTVAVKVFNTDMEEALRCFDIECAAMSNLHHRNLIKIISSCSNDDFKSLIMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGTSTPIVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQLETCTKTLATIGYMAPEYGSNGVVSFKGDVYSYGIMLMEMFTRKKPTDEMFVEGFGLKDWVSKSMPHSIINILDVNLLQKGNPNISNILSLMSSIFELALNCCIELPETRIMMTDVVVSLRKTRVYPCASLFLFASGSGFFDAALRQNGAGSRFLIMFVVLEVFFGFQQHSSSLGSRKWFKATIVDADWRQRRWARLLRKSLGLPPSTAVLTVPIASTNRVLRCGKPYFPRDEAITRWGDNSKCIAVAAPFFVLATLTDRDKSRKGPEFQV 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5166g00011 886 Gene3D Ribonuclease Inhibitor 1 103 IPR032675 -
Pral5166g00011 886 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515
Pral5166g00011 886 Pfam Leucine rich repeat 156 214 IPR001611 GO:0005515
Pral5166g00011 886 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Pral5166g00011 886 PANTHER OS04G0122200 PROTEIN 144 733 - -
Pral5166g00011 886 ProSiteProfiles Protein kinase domain profile. 463 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00011 886 SUPERFAMILY Protein kinase-like (PK-like) 441 735 IPR011009 -
Pral5166g00011 886 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 106 397 - -
Pral5166g00011 886 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 539 744 - -
Pral5166g00011 886 Pfam Protein kinase domain 464 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00011 886 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 2 98 - -
Pral5166g00011 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Pral5166g00011 886 Gene3D Ribonuclease Inhibitor 104 402 IPR032675 -
Pral5166g00011 886 SUPERFAMILY L domain-like 3 151 - -
Pral5166g00011 886 SUPERFAMILY L domain-like 126 387 - -
Pral5166g00011 886 SMART serkin_6 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5166g00011 886 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Pral5166g00011 886 Pfam Leucine Rich Repeat 108 129 IPR001611 GO:0005515
Pral5166g00011 886 Gene3D Phosphorylase Kinase; domain 1 445 538 - -
Pral5166g00011 886 SMART LRR_typ_2 154 177 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 226 249 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 321 344 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 273 297 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 178 202 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 106 130 IPR003591 -
Pral5166g00011 886 SMART LRR_typ_2 57 81 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5166g00011 Pral-Chr5166 144905 163709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5166g00011 1 739 Receptor kinase-like Gene Family AT3G47570 36.954 3.21e-150 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral5166g00011 Pkinase 4.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5166g00011 - K13420 pcin:129285519 957.207