Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5165g00013 GTTTTGGCTGTGAAAAAACTTGACTCTACCCATTTCCATGGCAGCTCTCCAGAGGAATTCTCTCAGATTGTATCAAAAATTTCCCAAGTTCACCACCCAAATATTGCTGAGCTTGTTGGTTATTCTTCAGAACAAGGAGACAACATGTTAGTGTATGAATATTTCCGAAATGGCTCTCTGCATGAATTTTTACATGTGTCAGACGACTTCAGCAAGCCACTAACATGGAATACTAGAGTTAACATCGCACTAGGCACAGCTCGAGCAGTTGAGTACCTGCATGAAGTTTGTTCTCCATCTTTAGTTCACAAGAACATCAAGTCTGCCAATATTCTGCTTGACAATGAACTCAACCCTCATCTCTCAGACTATGGTTTGGCATCCTTCCATCAGCGCACTAGCCAAAATCTTGGGGCTGGATATGATGCACCTGAGTGTTCAATACCTGATGCTTATACCCTGAAGAGTGATGTGTATAGTTTTGGGGTGGTCATGTTGGAGCTGTTAACAGGTCGAAAGCCTTTGGACAGGTCAAAGCCAAAATCAGAACAATGTCTTGTTCGTTGGGCCACCCCTCAGCTACATGACATTGATACATTGGCGAAAATGGTGGATCCTTCCTTGCGAGGACTTTACCCTCCTAAATCACTCTCGAGGCTTGCTGACATAATTGCTCTTTGTGTTCAGCCTGAGCTGGAATTTCGACCACTAATGTCAGAAGTGGTTCAGTCATTAGTAAGACTAGTTCAGCATTCAAGTATGAATATGAGAGAAGATATGGATGCTTGTGATGGATGA 798 0.4298 VLAVKKLDSTHFHGSSPEEFSQIVSKISQVHHPNIAELVGYSSEQGDNMLVYEYFRNGSLHEFLHVSDDFSKPLTWNTRVNIALGTARAVEYLHEVCSPSLVHKNIKSANILLDNELNPHLSDYGLASFHQRTSQNLGAGYDAPECSIPDAYTLKSDVYSFGVVMLELLTGRKPLDRSKPKSEQCLVRWATPQLHDIDTLAKMVDPSLRGLYPPKSLSRLADIIALCVQPELEFRPLMSEVVQSLVRLVQHSSMNMREDMDACDG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5165g00013 265 SUPERFAMILY Protein kinase-like (PK-like) 2 245 IPR011009 -
Pral5165g00013 265 PIRSF ILK 1 260 - -
Pral5165g00013 265 Pfam Protein tyrosine and serine/threonine kinase 3 245 IPR001245 GO:0004672|GO:0006468
Pral5165g00013 265 Gene3D Transferase(Phosphotransferase) domain 1 56 264 - -
Pral5165g00013 265 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 55 259 - -
Pral5165g00013 265 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5165g00013 265 Gene3D Phosphorylase Kinase; domain 1 1 55 - -
Pral5165g00013 265 PANTHER OS01G0253100 PROTEIN 2 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5165g00013 Pral-Chr5165 446750 451278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5165g00013 1 262 Strubbelig Receptor Gene Family AT1G78980 72.519 2.05e-135 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral5165g00013 PK_Tyr_Ser-Thr 3.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5165g00013 - - qsa:O6P43_028034 452.21