Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5165g00010 ATGGGCGCGCACAACGCTTGGCCTGTGCGCGTTCCTGAAGCAACTTCGTCTCTTCTTGTTCTTCTACTTCTTCTTCTCTCGTCGTCGACTCCTTCGCTGTCCTACTCCGATGCCGAAGCCCTCTTGAAGTTCAGAAGCTCTCTCAACGATGTCGTTGGTCTCAGCAATTGGGATCCCGCCGTCAACCCTAAGCCGCCGTGCACCGGCAATATCCCCAACTGGGTCGGCGTTTTCTGCATCAACAACTCTGTTTGGGGCTTCCGTCTCGAGAATATGGGCCTCATGGGCAACATTGACGTTGAAGCTCTGGCTTCCATGCCCCGTTTAAGGTCTATTAGCTTGATGAATAACACCTTCGCCGGACCTTTGCCTGAAATCAAGCGGGTGAAGAATTTGAAGTCGATATACTTATCGTACAACCATTTCTCCGGCGGCATCCCCGACGACGCGTTTGTTGGTATGAATATGTTAAAGAAAGTTTATTTGGCTAATAACGAGTTCACCGGCAAAATCCCTTCCTCCCTCGGCGTCTTGCCTAACCTTCTCGCCGTCCGGCTTGACGGCAACAAGTTTCACGGCCGAATCCCTAACTTTCAAAATACCACTTTGAAGCTTATCGACTTGTCTAACAATAATTTGGATGGCCCCATTCCAGAGAATCTATCCTCTTTCAGCGCCTTCGCCTTCACAGGGAACACACATTTATGCGGGCCTCCTCTGCGGAATCGATGCGCATCAATCCCTTACGCCACCATGGATTCTCCATCAAAGATAACGGTTCTGAGGATTCTGCTCATTTTAATTCTCACATTACTAATAATAGTGGTGATCGGATCGGCGATAGTGATAGCCCGCCTGAGAACACGCCGGAGATACGGAGACGACTCGGTCTCGACGTTCCGAAGTCAACCTTCTGCGAAGCACGCTCCTCCGGCGTACACAAAAGCGAAAAGCATAGGCGATCATTACGACAACACAAAGCTTCTTACTGAACAAAACCACAGTACTTATCAGAATACGCCATCGATATCGAAGAAAGGAGAAGCTGGGAAGTTGATATTTGTGAGGAAACGGGAGAAGAAGTTTGATTTGCAGGATATGTTGAAAGCGTCGGCGGAGATTCTGGGGAGTGCGGCGTTTGGGTCTTCGTATAAGGCGGTGATGAAGGATGATCAAGCGGTGGTTGTGAAGAGGTATAAGCATATGAACAATGTGTCAAGAGATGAGTTCTTTGAACACATGGCAAGGCTTGGAGATCTCTCTCATCCAAATCTGCTACCCCTCGTTGCTTATTATTACAGGAAAGAAGAGAAACTCTTGCTCTCGGACTTCGTTCCAAAGGGTTGCTTGGCCAGCCAACTTCATGGTAATCATAATGACGAGAAGCCAGGCTTAAACTGGTCAACTCGGTTGAAAATTGTGAAAGGAGTAGCGAGGGGTTTATCATACCTATACACTGCATTACCGAGCCTAGTAGTGCCTCACGGTCATATGAAATCTTCCAACATTTTATTAGACGAATCATACGAACCCTTGCTCACAGATTACGGTCTGATTCATGTGATCAATCTGGATCATGCTCAACAGATAATGATGCCATACAAATCGCCGGAGTACGCTCAACTTGGCCGGATCACGAAGAAGACGGACGTCTGGAGCTTCGGCATCGTGATTCTGGAGATCTTAACGGGCAAATTCCCAGAGAACTATCTGACTCACAGGCACGAAACTGTTTCAGACATTGCAAGCTGGGTGAATAGTATGATCACAGAGAAACGTACGGGTGAAGTGTTTGATGTTGAAATGGGAGGGATTGAGAATAGTAAGAGCGAATTGCTTAAACTTTTGAAAATTGGACTGAGTTGTTGTGAGGAGAATGTGGAGAGGAGATTGGATATGAAGGAAGCTCTGGACAAGATTGAAGAGTTGAAGGATGAAAGTGATGGAGATTTTTCTTTGATTGTTACCGGCGAACGGGATGCTTTTCAAGTTATATGA 1998 0.47 MGAHNAWPVRVPEATSSLLVLLLLLLSSSTPSLSYSDAEALLKFRSSLNDVVGLSNWDPAVNPKPPCTGNIPNWVGVFCINNSVWGFRLENMGLMGNIDVEALASMPRLRSISLMNNTFAGPLPEIKRVKNLKSIYLSYNHFSGGIPDDAFVGMNMLKKVYLANNEFTGKIPSSLGVLPNLLAVRLDGNKFHGRIPNFQNTTLKLIDLSNNNLDGPIPENLSSFSAFAFTGNTHLCGPPLRNRCASIPYATMDSPSKITVLRILLILILTLLIIVVIGSAIVIARLRTRRRYGDDSVSTFRSQPSAKHAPPAYTKAKSIGDHYDNTKLLTEQNHSTYQNTPSISKKGEAGKLIFVRKREKKFDLQDMLKASAEILGSAAFGSSYKAVMKDDQAVVVKRYKHMNNVSRDEFFEHMARLGDLSHPNLLPLVAYYYRKEEKLLLSDFVPKGCLASQLHGNHNDEKPGLNWSTRLKIVKGVARGLSYLYTALPSLVVPHGHMKSSNILLDESYEPLLTDYGLIHVINLDHAQQIMMPYKSPEYAQLGRITKKTDVWSFGIVILEILTGKFPENYLTHRHETVSDIASWVNSMITEKRTGEVFDVEMGGIENSKSELLKLLKIGLSCCEENVERRLDMKEALDKIEELKDESDGDFSLIVTGERDAFQVI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5165g00010 665 FunFam Pollen receptor-like kinase 1 445 652 - -
Pral5165g00010 665 Gene3D Transferase(Phosphotransferase) domain 1 445 656 - -
Pral5165g00010 665 SUPERFAMILY L domain-like 64 236 - -
Pral5165g00010 665 ProSiteProfiles Protein kinase domain profile. 369 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5165g00010 665 Gene3D Phosphorylase Kinase; domain 1 335 444 - -
Pral5165g00010 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 648 IPR046959 -
Pral5165g00010 665 Gene3D Ribonuclease Inhibitor 153 246 IPR032675 -
Pral5165g00010 665 FunFam pollen receptor-like kinase 1 338 444 - -
Pral5165g00010 665 Pfam Leucine rich repeat 131 191 IPR001611 GO:0005515
Pral5165g00010 665 Pfam Protein tyrosine and serine/threonine kinase 373 635 IPR001245 GO:0004672|GO:0006468
Pral5165g00010 665 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Pral5165g00010 665 Coils Coil 626 646 - -
Pral5165g00010 665 SUPERFAMILY Protein kinase-like (PK-like) 373 643 IPR011009 -
Pral5165g00010 665 Gene3D Ribonuclease Inhibitor 36 152 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5165g00010 Pral-Chr5165 237412 240273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5165g00010 18 661 Receptor kinase-like Gene Family AT5G35390 49.091 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5165g00010 PK_Tyr_Ser-Thr 2.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5165g00010 - - gmx:100801053 817.764