Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00042 ATGAAGCCGAGGATTTGTGAGTTGTGTAGCCAGGAGGCGTACCTGTATTGTGCCTCGGATTCTGCGTTTCTCTGCTGGAAATGTGACGCTAAGGTTCATGATGCCAATTTCTTAGTTGCTCGCCATATCCGGGAGGTTCTGTGTTGCGATTGCAAGTGTTTCGCAGGAAGACAGGTTTCCGGAAGCGTAGTGCCGCTTGAAACTATGTCCTGTCGGAATTGTTCGCCGGAGAAGCACTCCGATGAGGAGGATTGCCTGTCTTCGTCTTCCATGTCGGCTTGCGTGTCAAGCACGGAGTCCTGTGCTACAGGTCCGAAGAAGATTCGTCATCGGACGGAGACAGTGGCGTCGTCCGGTTCCGTCGCGGATGAGAGGTGCCCGGCGGAAGGGAAGAAGAAGAATCCTGGGCGGTGCGCGGCGGAGGAGGTATTCGTGAATTGGAGCAGAAAGTTAGGGTTAAATGGCAATTGCGTGGCGTCCTTGGCGTCGCAGGCGATGGGGAAACTAATGGCGGCGGTTCCGTTCAGAGTGGCGGTGGCGACGTCGTTTTGGTTCGGCCTGAGATATTGTGGCGACGGGCAGTTACGCACGGCTCAGAATTTGAGAAAGTTGGAGGAAATGTCGAAAGTGCCAGGCAAGGTGATCGTGGCGGCCGAGGAGAAGCTGACACGTGTCCTCAGACCCAAAAAAGCTAGGCGCGAATTCGAGGAAGGATGGGCCGAGTGCTAA 729 0.5528 MKPRICELCSQEAYLYCASDSAFLCWKCDAKVHDANFLVARHIREVLCCDCKCFAGRQVSGSVVPLETMSCRNCSPEKHSDEEDCLSSSSMSACVSSTESCATGPKKIRHRTETVASSGSVADERCPAEGKKKNPGRCAAEEVFVNWSRKLGLNGNCVASLASQAMGKLMAAVPFRVAVATSFWFGLRYCGDGQLRTAQNLRKLEEMSKVPGKVIVAAEEKLTRVLRPKKARREFEEGWAEC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00042 242 CDD Bbox1_BBX-like 5 44 - -
Pral5163g00042 242 Pfam B-box zinc finger 2 34 IPR000315 GO:0008270
Pral5163g00042 242 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 98 - -
Pral5163g00042 242 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pral5163g00042 242 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00042 Pral-Chr5163 429297 430766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00042 5 241 C2C2-CO-like Transcription Factor Family AT3G21150 36.214 2.94e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5163g00042 zf-B_box 4.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00042 - - pcin:129288868 409.068