Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00027 ATGGCTTTCTGGGGAGTGGAAGTCAGACCCGGAAAATCTTTCACTCATAAATTTGATGACTTGAAAGGACGACTCCATATTTCAATGGCCACTTTGGGGGTTGGCTCTGTTCCAGCCAAAAGCAGACTTCAGTTGATTGGTCCTCGGAGTATTCACTTGTGTGGTTACTATCTTGGTAGTGGCCGAAGAACCAATACGATTGAGGAGTCAGAATCCTATGGAGAAGATATTGCAAACACCGAGACAGATAGATCTGATTGCAGCGGAGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGCGAATCCAGAGGTCTACCCAGAATCACGTATTTCAAGTGAAGAGGAAGTTTCACATGTTAACAAACGTAAAGGTAGTCGCCGCCGACTACAGAAGAAGCACCAAAGAGTAGATTCAGATGATGACAGTTTGCCAATTTCATCTATTTACAAGAGTAAAGCTTCTGCAAAGGTTTTGTCTGAGGAAATGGATGTTAGTGATGACGGGAGACAAAGTGATGCCAGCCACAAGAATGGTGAAGATGATGGCAACAACGCTATTAAATCAAATTCAAAATCAAAAGCTGGCAATGGTCCTCTAGATGCTAAGACACATAGGGATGTTGCATTGCCTGCCACTGTAGTAGGTCCTGTAAAAAGTGGAGGAACAAAGAGGAAAAAGAAAGAACAGGCTTCCAAAGATTCACATTTTGAAGATGACAATGCTTACTGTAGGGAGCCCAAAGCCCAGAGAGAGGCAGAGACTGATATTGCTATCCCCAAAGTTTCTGAAGGAGAGAATCAAGATTTGCTGCCAAACAACAAAGAGAGTGGGGACAATGGCACTCATGACTTTCCTGATGGAAATCAATCTGGTGATGGAAAAATGAAAAAGAGGAGGAAAAAAGACAAAAGTCAGGGGGATGTAGAAGTTAATACTTCTGACATGCCTCAATCAACTGTTAATGAAGATATTAAGGCCGTGAAAAAGGATGAATACATTATGGCTGATGCGAAGCCTTCTGAAGTTAAAACATTGCCAAACGGTTTAGTTATTCAGGAGCTAGAAAAGGGGCTAGAAGATGGAAAAGTTGCTGCATTAGGGAGAAAGATTAGCGTCCTTTTCACTGGCAAGCTCAAGGATAATGATGAAGTCTTTGAGACAAATGTTGGTCATGCACCTTACAAGTTTCGCCTTGGCAAAGGACAAGTTATAGAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAATGGGAGGAAAGAGAAGACTCATAATCCCACCGTCCATGGGGTTTGGTAGTGAAGGACACGACACAAAAGTACCACCAAACTCGTGGCTAGTTTACGACTTTGAATTGGTTAAAGTCCGTTGA 1374 0.4258 MAFWGVEVRPGKSFTHKFDDLKGRLHISMATLGVGSVPAKSRLQLIGPRSIHLCGYYLGSGRRTNTIEESESYGEDIANTETDRSDCSGEDEYEDSFIDDDANPEVYPESRISSEEEVSHVNKRKGSRRRLQKKHQRVDSDDDSLPISSIYKSKASAKVLSEEMDVSDDGRQSDASHKNGEDDGNNAIKSNSKSKAGNGPLDAKTHRDVALPATVVGPVKSGGTKRKKKEQASKDSHFEDDNAYCREPKAQREAETDIAIPKVSEGENQDLLPNNKESGDNGTHDFPDGNQSGDGKMKKRRKKDKSQGDVEVNTSDMPQSTVNEDIKAVKKDEYIMADAKPSEVKTLPNGLVIQELEKGLEDGKVAALGRKISVLFTGKLKDNDEVFETNVGHAPYKFRLGKGQVIEGWDVGLEGMRMGGKRRLIIPPSMGFGSEGHDTKVPPNSWLVYDFELVKVR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00027 457 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 369 457 IPR001179 GO:0003755
Pral5163g00027 457 MobiDBLite consensus disorder prediction 87 102 - -
Pral5163g00027 457 MobiDBLite consensus disorder prediction 158 184 - -
Pral5163g00027 457 SUPERFAMILY FKBP-like 328 456 - -
Pral5163g00027 457 MobiDBLite consensus disorder prediction 268 288 - -
Pral5163g00027 457 MobiDBLite consensus disorder prediction 69 323 - -
Pral5163g00027 457 Gene3D - 317 457 IPR046357 GO:0003755
Pral5163g00027 457 MobiDBLite consensus disorder prediction 223 260 - -
Pral5163g00027 457 Gene3D Nucleoplasmin core domain 1 45 - -
Pral5163g00027 457 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 456 - -
Pral5163g00027 457 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 365 454 IPR001179 GO:0003755
Pral5163g00027 457 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00027 Pral-Chr5163 281571 288136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00027 369 457 Calmodulin-binding Proteins AT5G48570 37.079 1.55e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00027 K14826 - vvi:100267010 338.191