Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00026 ATGGCTTTCTGGGGAGTGGAAGTCAGACCCGGAAAATCTTTCACTCATAAATTTGATGACTTGAAAGGACGACTCCATATTTCAATGGCCACTTTGGGGGTTGGCTCTGTTCCAGCCAAAAGCAGACTTCAGTGTAATGTGGGCAACAATAGCCCTGTTTATCTATGTTCTCTGTCTTCTGGAACGAATGAGTCATTGCAACTTAATTTGGAATTTGAGGAGGTTGATGATGTCATCTTTTCAGTGATTGGTCCTCGGAGTATTCACTTGTGTGGTTACTATCTTGGTAGTGGCCGAAGAACCAATACGATTGAGGAGTCAGAATCCTATGGAGAAGATATTGCAAACACCGAGACAGATAGATCTGATTGCAGCGGAGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGCGAATCCAGAGGTCTACCCAGAATCACGTATTTCAAGTGAAGAGGAAGTTTCACATGTTAACAAACGTAAAGGTAGTCGCCGCCGACTACAGAAGAAGCACCAAAGAGTAGATTCAGATGATGACAGTTTGCCAATTTCATCTATTTACAAGAGTAAAGCTTCTGCAAAGGTTTTGTCTGAGGAAATGGATGTTAGTGATGACGGGAGACAAAGTGATGCCAGCCACAAGAATGGTGAAGATGATGGCAACAACGCTATTAAATCAAATTCAAAATCAAAAGCTGGCAATGGTCCTCTAGATGCTAAGACACATAGGGATGTTGCATTGCCTGCCACTGTAGTAGGTCCTGTAAAAAGTGGAGGAACAAAGAGGAAAAAGAAAGAACAGGCTTCCAAAGATTCACATTTTGAAGATGACAATGCTTACTGTAGGGAGCCCAAAGCCCAGAGAGAGGCAGAGACTGATATTGCTATCCCCAAAGTTTCTGAAGGAGAGAATCAAGATTTGCTGCCAAACAACAAAGAGAGTGGGGACAATGGCACTCATGACTTTCCTGATGGAAATCAATCTGGTGATGGAAAAATGAAAAAGAGGAGGAAAAAAGACAAAAGTCAGGGGGATGTAGAAGTTAATACTTCTGACATGCCTCAATCAACTGTTAATGAAGATATTAAGGCCGTGAAAAAGGATGAATACATTATGGCTGATGCGAAGCCTTCTGAAGTTAAAACATTGCCAAACGGTTTAGTTATTCAGGAGCTAGAAAAGGGGCTAGAAGATGGAAAAGTTGCTGCATTAGGGAGAAAGATTAGCGTCCTTTTCACTGGCAAGCTCAAGGATAATGATGAAGTCTTTGAGACAAATGTTGGTCATGCACCTTACAAGTTTCGCCTTGGCAAAGGACAAGTTATAGAGGGTTGGGATGTTGGCCTTGAAGGCATGCGAATGGGAGGAAAGAGAAGACTCATAATCCCACCGTCCATGGGGTTTGGTAGTGAAGGACACGACACAAAAGTACCACCAAACTCGTGGCTAGTTTACGACTTTGAATTGGTTAAAGTCCGTTGA 1485 0.4229 MAFWGVEVRPGKSFTHKFDDLKGRLHISMATLGVGSVPAKSRLQCNVGNNSPVYLCSLSSGTNESLQLNLEFEEVDDVIFSVIGPRSIHLCGYYLGSGRRTNTIEESESYGEDIANTETDRSDCSGEDEYEDSFIDDDANPEVYPESRISSEEEVSHVNKRKGSRRRLQKKHQRVDSDDDSLPISSIYKSKASAKVLSEEMDVSDDGRQSDASHKNGEDDGNNAIKSNSKSKAGNGPLDAKTHRDVALPATVVGPVKSGGTKRKKKEQASKDSHFEDDNAYCREPKAQREAETDIAIPKVSEGENQDLLPNNKESGDNGTHDFPDGNQSGDGKMKKRRKKDKSQGDVEVNTSDMPQSTVNEDIKAVKKDEYIMADAKPSEVKTLPNGLVIQELEKGLEDGKVAALGRKISVLFTGKLKDNDEVFETNVGHAPYKFRLGKGQVIEGWDVGLEGMRMGGKRRLIIPPSMGFGSEGHDTKVPPNSWLVYDFELVKVR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00026 494 MobiDBLite consensus disorder prediction 260 297 - -
Pral5163g00026 494 SUPERFAMILY FKBP-like 365 493 - -
Pral5163g00026 494 MobiDBLite consensus disorder prediction 305 325 - -
Pral5163g00026 494 MobiDBLite consensus disorder prediction 124 139 - -
Pral5163g00026 494 Gene3D - 354 494 IPR046357 GO:0003755
Pral5163g00026 494 MobiDBLite consensus disorder prediction 141 160 - -
Pral5163g00026 494 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Pral5163g00026 494 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 42 493 - -
Pral5163g00026 494 Gene3D Nucleoplasmin core domain 1 98 - -
Pral5163g00026 494 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 402 491 IPR001179 GO:0003755
Pral5163g00026 494 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 406 494 IPR001179 GO:0003755
Pral5163g00026 494 MobiDBLite consensus disorder prediction 106 360 - -
Pral5163g00026 494 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00026 Pral-Chr5163 281571 288138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00026 406 494 Calmodulin-binding Proteins AT5G48570 37.079 1.69e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00026 K14826 - vvi:100267010 403.675