Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00025 ATGAAGCTCCAATTTCTCCTCTTATGCTTGTTTGCCCCTTTATATGTTGCTTCTGCCCTGAGTTCAGATGGGTTGACTCTATTGTCTCTTCTCAACCACTGGACTTCTGCGCCTCCTTCCTTAAAGTCAAACTGGAATTCCTCTGATTCCACCCATTGCTCATGGAATACAATGCAACCGTTACAGCAACGTGGTCTTCTAAACCTCTCTGCATACCAGATTTTTGGTCAACTGGGACCAGAAATTGGACGGTTGACTCAGTTGCAGAACCTTTTGTTGGCAAGAAATGGTTTCTCAGGAACAATACCTGTTGAGCTAGCCCATTGTAGTCTGCTAGAGCATATAGATCTTTCTGAGAACCATTTCTCTGGAAACATACCTCCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACGTTTATATTCCAATCAACTAGGAGGAGCCATTCCAAATGAATTGGGAAGACTAAGTAAATTGGAGGACCTTGAATTGTATTTCAACCACTTGACAGGCGAAATTCCACTTACCATTTGGAAGATTCCGAACCTTGAGCATGTTCTTCTTCATAATAATAGCCTTTCAGGGAAATTACCTTCAGAGATGACAGAGCTGAAGCATCTGAAAAATATCTCATTGTTTGACAACCAGTTCTCTGGACCAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAATGAAGCTGGACTTGATGAATAATAAGTTTACGGGTGGTATCCCTCCAAATCTTTGTTTTGGTAAGCAACTACGCACTCTGAGTTTAGGTCTTAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGCGCGACTCTTAGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGATCTATTCCTGAGTTTGAAGGTGATCAGAATCTCATATACATGGACATCAGCAGGAACAATATTAGTGGAGAAATTCCATCAAGTTTAGGAAACTGTACAAATCTCACTGCTTTAATTTTGTCCACAAACAACATTACTGGGCCTATACCCTCAGAGCTAGGAAACCTTTGGCCCCTTCAAGTTTTGAATCTTGCTCACAACAACCTAGAAGGTCCATTGCCACAGCAGTTATCGTACTGTACCAAAATGGATACTTTTGATGTGGGATTCAATTTTATTAATGGTTCATTCCCATCAAGTATGAGGAGTTGGAAAGCACTGACCGTATTAATTTTAAGAGAGAACCGCTTTAGTGGGGTTATCCCATCTTTCTTCTCAGAATATGTCCAGCTTCTCCAGCTGCAACTTGGTGGAAATATGTTTGGAGGAAAAATTCCAGCGTCTATGGGATCATTGCAGAATCTGTTGTATGGATTGAATTTGAGTGCGAACAAATTAACAGGTGAGATTCCTTTAGAAATTGGGAAGTTGAAAAAGCTGCAAATTTTGGATATATCCTTGAACAATTTGACAGGAAGCATACATGTTCTTGGTGATCTCTCTTCATTGACTGAAGTCAATATATCACACAACTCTTTTGTCGGTGCTTTGCCAGAGTGGAACATACAACATCTGAATTTGCTGCCATCATCATTCATTGGCAACCCTGGTCTCTGTGTCCGTTGTTCAACCTCAAATGCCTCCACTTGCAAAAAACCTAGCTTCTTGAAACCGTGTGTTTCTGAATCAACTGATCACAAAGGCAGTAAACGTTCAATCTTATTCATAGTGCTAGGATTTGTAGTGTTTGTCATTTGCCTGTCAGTATCACTACTAATTTATGACCACCATTATGGCCAACAATCTAAGGAGGTGGTCCTTGGTCAAGGATTTGAGGAGTACTTGCCTTTTGGGCGGAGACGTATTTACTACAATGATATTGCTCGAGGTCTCATCTTGGGGGAAGGTAATGCTGACTGTGAAGCGCAAGAGGCTTTTGATTCAGATGTCAAAGGAGAATTCAGAATTGTTGACCTAATAAATGCTACGGAGAATCTACATGATCAATATGTGATTGGCGTAGGAGGGCATGGAATTGTTTATAAAGCCGAACTTGATTTCGGAATTTTTGCTGTTAAGAAGGTTGAATTTGCACGGAGCAATCGGAGGAAATTGAATTTGATTAAGGAAGTTGAAATGACTAAGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTTCTTGATGGGCGAGGAGTATGGTCTAACCATCAGCAGATACAGGGAAAATGGAAGCCTTCACGATGTTTTGCATGAAAGCAATCCAAAACCATACTTAGCTTGGAATGTCCGCTATATGATAGCTATTGGAATTGCAAAAGGACTAGCACATCTTCATCACAGCTGCGATCCTCCCATATTGCATCGAGACATCAAACCAAAGAATATACTCCTGGACTCTGATATGCAGCCTTATATTACAGATTTTGGTATTTCCCTTGCTTTGAATCAGTCATCTACTGTGGTGCGCATGCGGTCAACTTATCATATAGGTACACCTGGTTTTATGGCACCAGAGATTGCTTATGACGTAGTGCCAAGGTGTGAGCTTGATATATACAGTTATGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAAGTATTAGATTCCTCATTTGTGGAGCAGCAAACCACTTTAGCAGGGTGGTTTAAATCTACATGGACAAGAACAAGAACCCTTGAAGAAATTGTTGATTCAAGCCTTACAAGGGAGCTTTCAGATGTACATGTGAAGGCACAAGTTATCAAGACGCTTTTGGTGGCTTTAATATGTGTTCAGAAAGATCCGAGAAAGAGACTGAAAATGATTGATGTTGTTGATTTCTTTGAAACACCCACTGATCCAGCAAATTTTGTTCAACACGACGGAGCTTCGGTTCATTTGGGAATTTCCCTTGCGACCGCTGCGGCCTCTCTATTTTCTGAGGAGAAAGGCGGGATCCTTCCCAATTCAAACAATCGGCATATCGTCCGCAGAGGAACTCCTGGAGTTCTTTCTAAAGTTGAGTTACGTACTGGTGAAGCCGTTTATGTAAAGAAGCTGTTGTCTGCGGGGTATCCCTCAAGTATAACGAGAGAAGAAAAAATGAATAGAACGGTTAAGCACCGAAATATAATTAAACTGCATAGGCTTTGGACAGAAAAAGATGAAACTTTTCTCATGTTCGAGTACTTGTCAAATGGAAGCCTACATGATGTCTTGCATGGAAAGAACCCCCCACCATCCCTGAAGTGGGATGTCCGTTATAGGATAGCTATTGGCATTGCTCAAGGGTTGGCATATCTCCATCATGATTATGATCCTCCCATGGTGCACTTTGCCATCGAGACAAAAAATATACTTCTGGATTCTGATATGGAGCCTCGCATTGCTGGTTTCAGTGCTGCCCAATTTTTGTTTGAATTTGACACAACACCATCCTCATCTATTCTAGACACATCAGGGACAGAAAATCTTTATGCAACAACAATCACTAGGGAGTTTGATGTGTACAGTTATGGGGTAGTTTTGCTTCAGCTGATAACCCGAAAGAAGGCAATAGACTCATTGTATATGGGGGGAACTGAGATAGGGGTTTGGGTCAGAAATCTGTGGGAGGAGACAGGGGACATTCAAAAAATTGTTGATTCAAGACTTGCAGAGGAGGTTTTGAATTCAAATTCCAATGTACTTGAGCAAGTCACCCAAGTGCTTTCCTTGGCTTTGAGGTGCACCGAGACAGATCCATGCATGAGACCCACTATGAGAGATGTTATCAAGCAATTACTAGGTTTTTGA 3759 0.4118 MKLQFLLLCLFAPLYVASALSSDGLTLLSLLNHWTSAPPSLKSNWNSSDSTHCSWNTMQPLQQRGLLNLSAYQIFGQLGPEIGRLTQLQNLLLARNGFSGTIPVELAHCSLLEHIDLSENHFSGNIPPEIGNCKSLKSLRLYSNQLGGAIPNELGRLSKLEDLELYFNHLTGEIPLTIWKIPNLEHVLLHNNSLSGKLPSEMTELKHLKNISLFDNQFSGPIPQSLGINSSLMKLDLMNNKFTGGIPPNLCFGKQLRTLSLGLNQLQGGIPQDLGRCATLRRLVLNENNLSGSIPEFEGDQNLIYMDISRNNISGEIPSSLGNCTNLTALILSTNNITGPIPSELGNLWPLQVLNLAHNNLEGPLPQQLSYCTKMDTFDVGFNFINGSFPSSMRSWKALTVLILRENRFSGVIPSFFSEYVQLLQLQLGGNMFGGKIPASMGSLQNLLYGLNLSANKLTGEIPLEIGKLKKLQILDISLNNLTGSIHVLGDLSSLTEVNISHNSFVGALPEWNIQHLNLLPSSFIGNPGLCVRCSTSNASTCKKPSFLKPCVSESTDHKGSKRSILFIVLGFVVFVICLSVSLLIYDHHYGQQSKEVVLGQGFEEYLPFGRRRIYYNDIARGLILGEGNADCEAQEAFDSDVKGEFRIVDLINATENLHDQYVIGVGGHGIVYKAELDFGIFAVKKVEFARSNRRKLNLIKEVEMTKKIRHQNVARCLGFLMGEEYGLTISRYRENGSLHDVLHESNPKPYLAWNVRYMIAIGIAKGLAHLHHSCDPPILHRDIKPKNILLDSDMQPYITDFGISLALNQSSTVVRMRSTYHIGTPGFMAPEIAYDVVPRCELDIYSYGVVLLELITRKKVLDSSFVEQQTTLAGWFKSTWTRTRTLEEIVDSSLTRELSDVHVKAQVIKTLLVALICVQKDPRKRLKMIDVVDFFETPTDPANFVQHDGASVHLGISLATAAASLFSEEKGGILPNSNNRHIVRRGTPGVLSKVELRTGEAVYVKKLLSAGYPSSITREEKMNRTVKHRNIIKLHRLWTEKDETFLMFEYLSNGSLHDVLHGKNPPPSLKWDVRYRIAIGIAQGLAYLHHDYDPPMVHFAIETKNILLDSDMEPRIAGFSAAQFLFEFDTTPSSSILDTSGTENLYATTITREFDVYSYGVVLLQLITRKKAIDSLYMGGTEIGVWVRNLWEETGDIQKIVDSRLAEEVLNSNSNVLEQVTQVLSLALRCTETDPCMRPTMRDVIKQLLGF 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00025 1252 Pfam Protein kinase domain 660 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00025 1252 Pfam Protein kinase domain 991 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00025 1252 Gene3D Ribonuclease Inhibitor 230 541 IPR032675 -
Pral5163g00025 1252 SUPERFAMILY Protein kinase-like (PK-like) 645 935 IPR011009 -
Pral5163g00025 1252 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Pral5163g00025 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Pral5163g00025 1252 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 734 944 - -
Pral5163g00025 1252 SUPERFAMILY L domain-like 23 298 - -
Pral5163g00025 1252 SMART serkin_6 658 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00025 1252 Gene3D Ribonuclease Inhibitor 179 229 IPR032675 -
Pral5163g00025 1252 Gene3D Ribonuclease Inhibitor 21 178 IPR032675 -
Pral5163g00025 1252 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1052 1251 - -
Pral5163g00025 1252 Gene3D Transferase(Phosphotransferase) domain 1 1053 1252 - -
Pral5163g00025 1252 Gene3D Transferase(Phosphotransferase) domain 1 735 949 - -
Pral5163g00025 1252 Gene3D Phosphorylase Kinase; domain 1 979 1052 - -
Pral5163g00025 1252 SUPERFAMILY L domain-like 246 539 - -
Pral5163g00025 1252 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 213 542 - -
Pral5163g00025 1252 SUPERFAMILY Protein kinase-like (PK-like) 981 1249 IPR011009 -
Pral5163g00025 1252 ProSiteProfiles Protein kinase domain profile. 978 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00025 1252 ProSiteProfiles Protein kinase domain profile. 658 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00025 1252 Gene3D Phosphorylase Kinase; domain 1 629 733 - -
Pral5163g00025 1252 FunFam Nuclear pore complex protein NUP107 20 176 - -
Pral5163g00025 1252 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 255 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00025 Pral-Chr5163 268477 273625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00025 67 937 Receptor kinase-like Gene Family AT1G73080 43.850 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5163g00025 Pkinase 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00025 - - pcin:129288056 1864.35