Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00024 ATGAAGCTGCTATTATTTATCCTATGCTTTTCTCCTTCTTTCTATGGTACTTCTACCTTGAGTTTGGATGGGTTGACTCTATTATCACTACTGAAACGCTGGACTTCCGTGCCTCCTTCCTTAAATTCAAGATGGAAGTCCTCTGATTCTACCCCTTGTTCATGGCCAGGGATACAATGTGACCGTTACCAGAATGTGGTCTCTCTAAACCTCACCGCATCTCAGATTTTTGGTCACCTTGGGCCAGAAATTGGACAGCTGACTCACTTGCAGAAACTTTTGTTGGCCACAAATGGTTTCTCAGGTACAATACCCCCAGAGTTATGTAATTGTCGTCTGCTTGAGTATGTTGATCTTTCTGAGAATCATTTGTCAGGAAATATACCTTCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACAATTATATTCCAATCAACTCGGAGGAGCCATTCCAAATGAATTGGGAAGCCTAAGTAAATTGGAGGACATTAAATTGTATTTCAACCACTTGACAGGTGAAATTCCACTTGCCATTTGGAAGATTCAGAGTCTTAAGCATATCCTTCTTCATAATAATAGCCTTTCAGGGAAATTACCTTCAGAGATGACAGAGCTCAAGCATCTGAAAAATATCTCATTGCTTGACAACCGATTCTCTGGACCAATTCCTCAAAGCCTGGGAATCAATAGCAGTTTAGTGAAGCTGGACATGATGAATAATAAGTTTACTGGTGGCATCCCCCCAAATCTTTGTTTTGGAAAGCAACTCCGCACACTGCTTTTAGGTCATAATCAATTTCAAGGGGGCATACCTCCAGATTTGGGAAGATGTGCAACTCTTGCAAGGTTGGATCTCAGTGACAATAATCTTTCTGGGCCTATTACTAAATTTGAAGGTAATAATGATCTCATGTACATGGACATGAGCAAGAACAACATCAGTGGAGAAATTCCATCTACTTTGGGAAGCTGCACAAATCTCATTGGTTTAATTCTGTCCACAAATAACATCACAGGGCTTATACCCTCAGAGTTAGGAAACCTTTTGAACCTTCAGGTTCTGAATCTTGCTCACAATAATCTAGTCGGTACTTTGCCGCTGCAACTGTCGTACTGTACCAAAATGTTTGCATTTGACGTGGGATTCAATTTTCTTAATGGTTCATTCCCATCAAGCATGAGGAGCTGGACAGTTATAGGCAGATTAATTTTAAGGGATAATCATTTCAGTGGGGTTGCCCCATTTTTCTTCTCAGATTATACCCAGCTTCTCGAATTACAACTTGGTGGAAATATGTTTGAAGGAGTAATTCCCGAATCAATTGGATTCAATAGCTTGTGGATGCTCGAAAGCCTGGATTTATCCCTGAACAATTTGACAGGAAGCATACAAGCTCTTGGCATATTTTTTTCATTAACAAAATTCAATATATCTTACAACTCATTTTTTGGTCCTTTACCAGAAGGGGTAACGGGATCTCCATCATCTTTCTTGGGAAATCCTGGCCTCTATGTTCGTTGTTCAACCTCGGATGTCTCGGGTTGTGAATACCAATTAGGATCAACTGGCCCCAAAGGCAGTAAAAAACCAATTTTATTTATAGTGCTTGTCATTTGCTTGTCATTTGTAATCTGCCTCTCATCTGTCACTCGCATCTGCTGGTTTATGCAAATATCTAATGGGGAGGTCAATGTTGACCATGAAGAACAAGAGGATTTGTTTTCAAACGATGAAGGATTTTCTAGAATTTTTAACCTACTAGATGCTACAGAACAGCTACATGATCAACATATAATTGGTGAAGGAGGGCAAGGAATTGTTTATAAAGCCGAACTTGATATTGGAGTTTTTGCTGTTAAGAAGGTTAAATTTGCACAAAGCAATAGGAGGAAACCAAACATGATCAGGGAAATTGAAATGACTAGGAAGATGAGGCATCAAAATGTGGCAAGATGCCTAGGCTCCCGGATTGGTAAGGAATATGGTCTAAACATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTACATGAAAATGTTCCGCTACCCTACTTAGCATGGAATGTCCGCTACAAAATTGCTATTGGAATTGCAAAAGGACTAGCATACCTCCATCATGATTGTGATCCACCCATATTGCACCGAGACATCAAACCAAAGAATATACTCCTTGATTCTGATATGCAACCTTGTATTACTGATTTTGGTATTTCGATTGCTTTGAATCAATCCTCTTCTACGGTGCGGCTACGGTCAACATATCATATAGGTACTCGTGGCTTCATGGCACCAGAGACTGCATGTGTGGTAGTGCCCAGCTGTGAGCTTGATGTATATAGCTATGGGGTAGTTTTGCTTGAGCTGATAACTAGAAAGAAAGTATTAGACTCCTCATTTTTGGAAGAGGAAACCACTTTGGTGGGTTGGTTTAAATCTGTATGGAGGAGAACGAATGAACTTGAAGAGATTGTTGATTCATCCCTTGTAAGGGAGCTTTCAGGTTTAGACGTAAAGGTGCAAGTCATCAAAGTGCTTTTGGTGGCTCTAATTTGTACTGAGACAGATCCAGGAAAGAGACTGAAAATGAGAGATGTCATCGAATTCTTTGAAACGCCCACTGATCCAGGAATTTTCATTCAGCATGACAGAGCGTTTCATCTAGGGGGTTCTCTTGCTGCTGCAGCAGCCTCTATATTTTTCCAGGAGGAAGTCAAGATCACTGCCAATAGAGGTTCTTACCCAATTATTCACAAGCTGATGGCGCGTGATTTGAACAATTCAAATATTATTGGCAGAGGAGCTCATGGTGTTGTATATAAATATTCACTAGGAGCATCCCTAGTTTATGCTGTAAAGAAGGTTTCATTTGCTGGTAACAAAAGAAAGATTGTAAAGATAGCTAGAGAAATTGAAATCATTGCAAAGATTAGGCACCGAAATCTGGGCAGATTGCTAGACTTTTTGTTCATAAAGGACTGCTGTCTGATCTTGTACAATTACATGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCGCCATGCCTAGAGTGGAATGTCCGGTATAGGATTGCTCTTGGAATTGCTCATGGGTTGGCTTATCTCCATTATGTTTGTCATCCTGCCATAGTGCACTGTGCCATCAAACCTAAAAATATACTTCTGGATTCTGATATGGATCCTCGTATTGCTAATTTTGGTGTTGCCAAGCTTTTGGATCAGTCTTCTTCTTCAACATCATCTTTACCAGTTCCAGGCACACAAGGGTATATAACACCAGAGAGCACATATACAACAGCAAATACCAGGGAGTTTGATGTTTACAGTTATGGGATAGTTTTGCTTCAGTTGATAACTAGAAAGAAGGCAGTAGATCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTCAGAACTCAATGGAGGGAAACAGGAGACATTAATACAATTGTTGATTCAAGCCTTGCAGAGGAGGTTTTGAAGTCAGATGTACTTGAACGAGTTACCATAGTGCTTTTGCTGGCTTTGAGTTGCACGGAGAAGAATCCGCACATGAGACCCACAATGAGAGATGTCATCAAGCAGTTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGCTTCCAAGTTCCATCTCCTTAAAGACCCGTAGTTGA 3681 0.4018 MKLLLFILCFSPSFYGTSTLSLDGLTLLSLLKRWTSVPPSLNSRWKSSDSTPCSWPGIQCDRYQNVVSLNLTASQIFGHLGPEIGQLTHLQKLLLATNGFSGTIPPELCNCRLLEYVDLSENHLSGNIPSEIGNCKSLKSLQLYSNQLGGAIPNELGSLSKLEDIKLYFNHLTGEIPLAIWKIQSLKHILLHNNSLSGKLPSEMTELKHLKNISLLDNRFSGPIPQSLGINSSLVKLDMMNNKFTGGIPPNLCFGKQLRTLLLGHNQFQGGIPPDLGRCATLARLDLSDNNLSGPITKFEGNNDLMYMDMSKNNISGEIPSTLGSCTNLIGLILSTNNITGLIPSELGNLLNLQVLNLAHNNLVGTLPLQLSYCTKMFAFDVGFNFLNGSFPSSMRSWTVIGRLILRDNHFSGVAPFFFSDYTQLLELQLGGNMFEGVIPESIGFNSLWMLESLDLSLNNLTGSIQALGIFFSLTKFNISYNSFFGPLPEGVTGSPSSFLGNPGLYVRCSTSDVSGCEYQLGSTGPKGSKKPILFIVLVICLSFVICLSSVTRICWFMQISNGEVNVDHEEQEDLFSNDEGFSRIFNLLDATEQLHDQHIIGEGGQGIVYKAELDIGVFAVKKVKFAQSNRRKPNMIREIEMTRKMRHQNVARCLGSRIGKEYGLNISRYMENGSLHDVLHENVPLPYLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILLDSDMQPCITDFGISIALNQSSSTVRLRSTYHIGTRGFMAPETACVVVPSCELDVYSYGVVLLELITRKKVLDSSFLEEETTLVGWFKSVWRRTNELEEIVDSSLVRELSGLDVKVQVIKVLLVALICTETDPGKRLKMRDVIEFFETPTDPGIFIQHDRAFHLGGSLAAAAASIFFQEEVKITANRGSYPIIHKLMARDLNNSNIIGRGAHGVVYKYSLGASLVYAVKKVSFAGNKRKIVKIAREIEIIAKIRHRNLGRLLDFLFIKDCCLILYNYMPNGNLHDVLHEKNPPPCLEWNVRYRIALGIAHGLAYLHYVCHPAIVHCAIKPKNILLDSDMDPRIANFGVAKLLDQSSSSTSSLPVPGTQGYITPESTYTTANTREFDVYSYGIVLLQLITRKKAVDPSFMNGTEIGIWVRTQWRETGDINTIVDSSLAEEVLKSDVLERVTIVLLLALSCTEKNPHMRPTMRDVIKQLEDANPRTRSKKLPSSISLKTRS 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00024 1226 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 178 - -
Pral5163g00024 1226 SUPERFAMILY Protein kinase-like (PK-like) 917 1204 IPR011009 -
Pral5163g00024 1226 SUPERFAMILY Protein kinase-like (PK-like) 585 872 IPR011009 -
Pral5163g00024 1226 Gene3D Ribonuclease Inhibitor 183 302 IPR032675 -
Pral5163g00024 1226 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1005 1216 - -
Pral5163g00024 1226 Gene3D Phosphorylase Kinase; domain 1 906 1004 - -
Pral5163g00024 1226 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 671 878 - -
Pral5163g00024 1226 Pfam Protein kinase domain 930 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 Pfam Protein kinase domain 596 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 ProSitePatterns Protein kinases ATP-binding region signature. 934 957 IPR017441 GO:0005524
Pral5163g00024 1226 SUPERFAMILY L domain-like 256 494 - -
Pral5163g00024 1226 ProSiteProfiles Protein kinase domain profile. 595 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 Gene3D Phosphorylase Kinase; domain 1 578 665 - -
Pral5163g00024 1226 Gene3D Transferase(Phosphotransferase) domain 1 1005 1221 - -
Pral5163g00024 1226 Gene3D Transferase(Phosphotransferase) domain 1 671 879 - -
Pral5163g00024 1226 SMART serkin_6 595 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 SMART serkin_6 928 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 MobiDBLite consensus disorder prediction 1207 1226 - -
Pral5163g00024 1226 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Pral5163g00024 1226 ProSiteProfiles Protein kinase domain profile. 928 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00024 1226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Pral5163g00024 1226 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 123 871 - -
Pral5163g00024 1226 Gene3D Ribonuclease Inhibitor 303 518 IPR032675 -
Pral5163g00024 1226 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Pral5163g00024 1226 SUPERFAMILY L domain-like 22 299 - -
Pral5163g00024 1226 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 201 296 - -
Pral5163g00024 1226 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 297 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00024 Pral-Chr5163 222749 248364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00024 64 871 Receptor kinase-like Gene Family AT1G17750 43.571 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5163g00024 Pkinase 5.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00024 - - pcin:129289575 1709.89