Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00023 ATGCAAGGGTCATCTAAGCACCGAAATATAGTTCAGAGTTGGAGCGTGGAAGACGTGAGTACAGACTCCGACGAGTTCTTGCCATCAATTGGAAGCTTACATGATGTTTTGCATGAGAAGAAACCCCCCTCGTTCCTGAAGTGGGGTGTCTGTTATAAGATAGCTACTGGCATTGCTCGAGGTTTGGCATATCTCCATGATTGTGATCCTCCCGTAGTGCACTGTGCCATCACGCCAAAAAATATATTTCTGGATTCTGATATGGAGCCTCGTATTGCTGATTTTGGTGCTGCCAAACTTTTATTTCAATCTTTTACAACGCCATCCTCATCTATCCTAGGCACACCAGGGACCAAAAAGCTGTATGCAACAACAATCACTAGGGAGTTTGATGTGTACAGTTATGGGATTGTTTTGCTTCAGCTGACAACCAGAAAGAAGGCAATAGACTCATCGTTTATGGGGGGAACTGAGATAGGGGTTTGGGTCAGAAGTCTGTGGGAGGAGACAGGAGATATTCTTAAAATTGTTAATTCAAGCCTTGCAGAGGAGGTTTTGAAATCAAATTCCAATGTACTCAAACAGGTCACTGAAGTGCTTTCCTTGGCTTTGAGCTGCACCGAGGAGATATTCAAAGAACCATTTTGGGAAAAGAAAGGGACTACCCACCATGACCTATCAGTAGCTTGA 690 0.4391 MQGSSKHRNIVQSWSVEDVSTDSDEFLPSIGSLHDVLHEKKPPSFLKWGVCYKIATGIARGLAYLHDCDPPVVHCAITPKNIFLDSDMEPRIADFGAAKLLFQSFTTPSSSILGTPGTKKLYATTITREFDVYSYGIVLLQLTTRKKAIDSSFMGGTEIGVWVRSLWEETGDILKIVNSSLAEEVLKSNSNVLKQVTEVLSLALSCTEEIFKEPFWEKKGTTHHDLSVA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00023 229 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00023 229 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 25 210 - -
Pral5163g00023 229 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00023 229 Gene3D Transferase(Phosphotransferase) domain 1 29 213 - -
Pral5163g00023 229 Pfam Protein kinase domain 5 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00023 229 SUPERFAMILY Protein kinase-like (PK-like) 5 153 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00023 Pral-Chr5163 218329 219669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00023 3 209 Receptor kinase-like Gene Family AT1G73080 43.182 4.89e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5163g00023 Pkinase 4.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00023 - - pcin:129288056 270.396