Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00020 ATGATGCGTCTCTGGGTGCTTCTTCCTCTATGCTTTTCTTCCTTGTTATGCTCTGTTTCTGCTTTGAGCTCTGATGGGGTGACCCTATTGTCACTCTTGAGGCACTGGACTTCTGTACCTCATCCTGTAAAGTCCTCCTGGAATCTCACAGATTCCACTCCTTGCTCTTGGGTTGGAATCCATTGCGACCATGCCCACAATGTGATCTCCCTTAACCTCACTGAGTATGGGATTGAGGGTCAAGTAGGACCTGAGATTGGACTTTTGAGTCACTTGAAGAGCTTTGTATTGCTGAACAATGGCTTCTCTGGAACAATTCCTCCTGAGTTAGGGAATTGTAGTATGCTAGAGTACTTGGACCTTTCTGAAAACCACTTGAAAGGACAAATACCTATGAGCTTCAAAAACTTGCAGTATTTGAAGTATATCAACCTAACTTTGAATCAACTCACTGGCCAAATCCCAGAATTCATCACTCAAATCCCTCAACTGCAACATGTTGACATGTCTAATAACTCTCTCAACGGTCCAATTCCTTCAGGTATAGGGAACATGAGCGAGCTTTTGCTCCTGTATCTGCAGAATAATCAGTTGTCTGGTGAAATTCCTTCCTCAATTGGGAATTGCAGTAAATTGCAGGAATTGTTCTTGAATGAGAATCACATTCAAGGGACTCTTCCAGAGACACTCAACAATCTCCATGATATTGTTTATCTGGGCTTTGCTAATAATAATCTTAGGGGTACTATTCCATTGGGTTCTGGCAGTTGTGAAAATTTGATTTTCTTGGATCTGTCATACAATGAATTCAGTGGGGGTATTCCTTCAAGATTGGGAAATTGTAGTGGCTTAACAGAATTTATTGCTGTTAGCAGTGGCTTAAGTGGCAGTATTCCATCGTCCATTGGTCTGCTTCGCAAGCTTTCCCTTTTAAGCCTTCCTGTGAATCATTTGTCTGGAAAAATTCCTCCGGAGATTGGCAACTGCAAGTCTTTGACACAGTTGCATTTGTATTCCAATCAACTTGAGGGAGAAATTCCGAGTGAGCTGGGAAAGTTGAGTGACTTACAGGATCTTGAATTGTTTTGCAACCATCTCACTGGCGAAATTCCTCTCAGTGTCTGGAAGATTCAAAGTCTTGAGTATATCCTTGTGTACAATAATAGCCTCTCTGGGGAGCTACCTTTGGAGATGACAGAGCTGAGGCATCTGAAGAATATTTCATTGTTTAACAACCACTTCGCTGGAGTCATACCTCAAACTTTGGGGATCAAAAGCCGTTTATTACAGCTGGACTTTACGGATAATAAATTCACTGGTAACATCCCGCCAAATCTTTGCTCTGGAAAGAAGTTAACTGTGCTGAATTTGGGCCTTAATCAGCTTCAGGGTGGCATACCTCCAGATGTAGGAAGGTGTACATCTCTTAAAAGGTTGATTCTCAAAGAGAATAATTTTACAGGGCCCTTACCTGATTTTGAATATAATCCAAATCTCACGTTCATGGATATCAGTGGGAACAATATCAATGGCTCAATCCCACCCAGTTTGGGAAACTGCTCAAATGTCACTGATTTAATTTTGTCCAATAACAACTTTGAGGGGCATATACCCCCAGAGCTAGGTCACCTTGCAAACCTGGAGACTCTGCATCTCGCTCACAACCACCTAGAAGGTCGCTTGCCACATGAGCTGTCAAAATGTACTAAAATGGACAGTTTTGATGTGGGATTCAATTTCCTAAATGGTGCATTTCCACCAAGCTTGAGGAGCTGGACGGTGCTAACCACATTAATTCTGAGAGAGAATCGTTTCCATGGGGGTATCCCGGATTTCTTGTCAGAATTTAATGAGCTCTCTGAGCTACAGCTTGGTGGAAATATGTTTGGAGGACAAATTCCAGGATCAATTGGGGCGTTGCAGAATCTGCGCTATGGGTTGAATCTAAGTGCTAATGGGCTGATTGGCGACATTCCTCCAGAGATGGGAAAATTATCAAATCTGCTAACTCTGGATCTATCTGGGAACAATTTGACTGGAAGCATACGAGTTCTTGCTGACCTTTCTTCATTACTTAAAGTCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCAAAGATGCTGATGAAGCTGCTTAATTCTGATCCTTCTTCATTTTTGGGGAATCCTGGCCTGTGTGTCAGTTGTTTATCATCAAACAGATCGGATTGCAATCAGAGCAGCCATCTAAAGCCATGTGATGATAGATTGACAAGCCAGAAAGGGCTTAGTAAATTACAAGTAGCAATGATAGCACTTGGATCATCAATATTTTTTGTTCTTTTGCTGCTGGGAGTAGTCTATATGTGTGTCCGTTGCAGAAAACCTAAGCAGGAAGTCCAGATTTCTGACAAAGAAGGCACTTCCTCACTTCTTAACAAAGTGATGGAGGCTACTGCTAACCTGAGTGACCGGTTTATCATCGGTAAAGGGGCTCATGGAGTAGTTTATAAAGCTTCAGTAGATCCAGGCCAAGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCAAAAGCATGGTTAGAGAAATTCAAAGCGTTGGAAAGATTAGGCACCGAAATCTGGTCAAATTGGAAGACTTCTGGTTGAAAAAAGACTTTGGTCTGATCTTGTACACCTACATGCCAAATGGAAGCCTTCATGAAGTTTTGCATGAAAAGCACCCACCGCCATCTGTAGAGTGGAATGTGCGATATAAGATAGCCATTGGCATTGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCTCCCATAGTACATCGTGACATCAAACCAAAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATCGCCAAGCTATTGGATCAATCTTCTGTTTCAGCATCATCTATATCTGTCGCTGGCACAATAGGTTATATTGCACCAGAGAATGCATATTCGACGGCAAATAATAGAGAATCTGATGTTTACAGTTATGGGGTAGTTTTACTTGAGTTGATAACCAGAAAGAAGGCAGTGGATCCATCATTTATGGGGGGAGTTGATATAATGAGCTGGGTCAGAACTCTGTGGGCTGGAACAGAAGATGTTCATAAAATTGCTGATTCAAGTCTTGCGGGGCAGTTTCTGGATTCAAATGTTCTTGAACAAGCTACCAAAGTGCTTTTGGTGGCTCTGAAATGCACGGAGATCGATCCACGCATGAGACCGACAATGAGAGATGTTATCAAGCAATTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGCGTCCAAGTTCCAGCTCCTTAATCCGTAGTTGA 3342 0.421 MMRLWVLLPLCFSSLLCSVSALSSDGVTLLSLLRHWTSVPHPVKSSWNLTDSTPCSWVGIHCDHAHNVISLNLTEYGIEGQVGPEIGLLSHLKSFVLLNNGFSGTIPPELGNCSMLEYLDLSENHLKGQIPMSFKNLQYLKYINLTLNQLTGQIPEFITQIPQLQHVDMSNNSLNGPIPSGIGNMSELLLLYLQNNQLSGEIPSSIGNCSKLQELFLNENHIQGTLPETLNNLHDIVYLGFANNNLRGTIPLGSGSCENLIFLDLSYNEFSGGIPSRLGNCSGLTEFIAVSSGLSGSIPSSIGLLRKLSLLSLPVNHLSGKIPPEIGNCKSLTQLHLYSNQLEGEIPSELGKLSDLQDLELFCNHLTGEIPLSVWKIQSLEYILVYNNSLSGELPLEMTELRHLKNISLFNNHFAGVIPQTLGIKSRLLQLDFTDNKFTGNIPPNLCSGKKLTVLNLGLNQLQGGIPPDVGRCTSLKRLILKENNFTGPLPDFEYNPNLTFMDISGNNINGSIPPSLGNCSNVTDLILSNNNFEGHIPPELGHLANLETLHLAHNHLEGRLPHELSKCTKMDSFDVGFNFLNGAFPPSLRSWTVLTTLILRENRFHGGIPDFLSEFNELSELQLGGNMFGGQIPGSIGALQNLRYGLNLSANGLIGDIPPEMGKLSNLLTLDLSGNNLTGSIRVLADLSSLLKVNVSYNSFDGPVPKMLMKLLNSDPSSFLGNPGLCVSCLSSNRSDCNQSSHLKPCDDRLTSQKGLSKLQVAMIALGSSIFFVLLLLGVVYMCVRCRKPKQEVQISDKEGTSSLLNKVMEATANLSDRFIIGKGAHGVVYKASVDPGQVFAVKKLAFSGNKGKSKSMVREIQSVGKIRHRNLVKLEDFWLKKDFGLILYTYMPNGSLHEVLHEKHPPPSVEWNVRYKIAIGIAHGLAYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSVSASSISVAGTIGYIAPENAYSTANNRESDVYSYGVVLLELITRKKAVDPSFMGGVDIMSWVRTLWAGTEDVHKIADSSLAGQFLDSNVLEQATKVLLVALKCTEIDPRMRPTMRDVIKQLEDANPRTRSKKRPSSSSLIRS 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00020 1113 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Pral5163g00020 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Pral5163g00020 1113 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 69 145 - -
Pral5163g00020 1113 Gene3D Ribonuclease Inhibitor 145 251 IPR032675 -
Pral5163g00020 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 450 736 - -
Pral5163g00020 1113 PRINTS Leucine-rich repeat signature 116 129 - -
Pral5163g00020 1113 PRINTS Leucine-rich repeat signature 665 678 - -
Pral5163g00020 1113 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 274 - -
Pral5163g00020 1113 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Pral5163g00020 1113 SUPERFAMILY L domain-like 316 419 - -
Pral5163g00020 1113 ProSiteProfiles Protein kinase domain profile. 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00020 1113 SMART serkin_6 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00020 1113 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Pral5163g00020 1113 Gene3D Ribonuclease Inhibitor 253 492 IPR032675 -
Pral5163g00020 1113 Gene3D Ribonuclease Inhibitor 493 745 IPR032675 -
Pral5163g00020 1113 Gene3D Transferase(Phosphotransferase) domain 1 893 1110 - -
Pral5163g00020 1113 SUPERFAMILY Protein kinase-like (PK-like) 805 1092 IPR011009 -
Pral5163g00020 1113 ProSiteProfiles Leucine-rich repeat profile. 667 689 IPR001611 GO:0005515
Pral5163g00020 1113 FunFam Predicted protein 297 396 - -
Pral5163g00020 1113 FunFam Serine/threonine-protein kinase-like protein CCR4 893 1110 - -
Pral5163g00020 1113 SUPERFAMILY L domain-like 24 286 - -
Pral5163g00020 1113 SMART LRR_typ_2 544 568 IPR003591 -
Pral5163g00020 1113 SMART LRR_typ_2 665 692 IPR003591 -
Pral5163g00020 1113 SMART LRR_typ_2 329 353 IPR003591 -
Pral5163g00020 1113 SMART LRR_typ_2 185 209 IPR003591 -
Pral5163g00020 1113 Gene3D Phosphorylase Kinase; domain 1 781 892 - -
Pral5163g00020 1113 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 782 892 - -
Pral5163g00020 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 21 179 - -
Pral5163g00020 1113 Pfam Protein kinase domain 821 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00020 1113 SUPERFAMILY RNI-like 407 740 - -
Pral5163g00020 1113 ProSitePatterns Protein kinases ATP-binding region signature. 822 845 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00020 Pral-Chr5163 186257 190043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00020 13 1101 Receptor kinase-like Gene Family AT1G73080 53.224 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5163g00020 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00020 - - gmx:100778035 1449.88