Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00014 ATGAGGCCAACTCAGCCACCTCTCGCTGCTGGAGCTCCCAATCGTGACCGTAAGCGGTTTGGCCGTAAAGACCTGACCTTGCCAATGCCGCCGCGTGACCATTCAAGAGCGGTGCCTCTTCCTCTTCCGCCGTCCAGCTCGGCGCCCTCGACCAGTCACCATGCCGGCCCTGTTCACCAGCTTATCCCCTTCTCCGAGCTCGAACGGCTCAACCGAATCGGTAGCGGGGCCGGCGGTACCGTATATAAGGTCGTCCACCGACCTACCGCTCGGGTTTTCGCGTTGAAGGTTATATACGGCCATCACGAGGACTCCGTGCGTCGACAGATCCATCGCGAAGTCCAGATCCTTCGGGACGTGGATGACCAGAACGTGGTCAAATGTTACGATATGTATGATCACAACGCTGAAATCCAAGTGCTTCTCGAGTTCATGGACGGTGGGTCCTTGGAAGGGCAACACATCCCCGACGAGCAGCGCCTTGCAGATCTAGCTCGTCAGATTCTCCGTGGCCTCGCCTACCTCCATCGCCGCCACATCGTTCACCGAGACATCAAGCCCTCGAATCTTCTGATCAACTCGCGCAACCAAGTCAAGATTGCGGACTTCGGTGTGGGTCGGATTCTCGCGCAAACTATGGATCCGTGTAATTCATCGGTGGGGACGATCGCATATATGAGCCCCGAGAGAATCAATACGGACATCAACGATGGACAATACGATGCGTATGCTGGCGATATATGGAGCCTTGGAGTGAGTATACTGGAATTTTACATGGGTAGATTTCCCTTTGCGGTCGGAAGGCAAGGGGATTGGGCCAGTTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCTCCAGCGACGGCGTCGACTGAATTTAGGGATTTCATATCGCGCTGTTTGCAGAGAGATCCGTCGCGGAGGTGGACGGCGACGAGATTGTTAGGGCATCCTTTTATAAATCCGGGAATTCGACAACAGAATCCAGTTCATCAGAATCTTCATCAACTGCTACCTCCTCCTCGCCCGCTTTCTTCCTAG 1047 0.5492 MRPTQPPLAAGAPNRDRKRFGRKDLTLPMPPRDHSRAVPLPLPPSSSAPSTSHHAGPVHQLIPFSELERLNRIGSGAGGTVYKVVHRPTARVFALKVIYGHHEDSVRRQIHREVQILRDVDDQNVVKCYDMYDHNAEIQVLLEFMDGGSLEGQHIPDEQRLADLARQILRGLAYLHRRHIVHRDIKPSNLLINSRNQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPATASTEFRDFISRCLQRDPSRRWTATRLLGHPFINPGIRQQNPVHQNLHQLLPPPRPLSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00014 348 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Pral5163g00014 348 SMART serkin_6 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00014 348 CDD PKc_MAPKK_plant_like 65 323 - -
Pral5163g00014 348 Pfam Protein kinase domain 68 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00014 348 ProSiteProfiles Protein kinase domain profile. 67 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5163g00014 348 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 50 324 - -
Pral5163g00014 348 Gene3D Phosphorylase Kinase; domain 1 48 146 - -
Pral5163g00014 348 Gene3D Transferase(Phosphotransferase) domain 1 148 338 - -
Pral5163g00014 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Pral5163g00014 348 SUPERFAMILY Protein kinase-like (PK-like) 64 342 IPR011009 -
Pral5163g00014 348 MobiDBLite consensus disorder prediction 1 57 - -
Pral5163g00014 348 MobiDBLite consensus disorder prediction 15 30 - -
Pral5163g00014 348 FunFam Mitogen-activated protein kinase 2 147 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00014 Pral-Chr5163 125031 126687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00014 1 348 MAP Kinase Kinase Gene Family AT3G21220 71.307 4.08e-169 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral5163g00014 Pkinase 1.2e-64 CL0016