Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00011 ATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTTCAGGAAAAGTCCAGACTTTTGATTTTGAGACAGCACATGTACTTTCTCCTGGAAGCTTGGCCAGCTCATCCTTTAAGCGGATACAGATCCGACCCTTCAGGAGCATATATATTGTCCTATTTAAAGCAAAGATCAACATGTTGCTACCTTTTGGTCCATTGGCGATATTGCTACGTTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTGCTCCCTTGGCAGAACGTTTGGGATATGCTACTGAGCAGCTTGCATTGTATACTGGACCAACAGTTGGAGGTCTGCTAAATGCCACATTTGGCAATGCCACTGAAATGATTATATCCATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTGTTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGAATTGTCCACCACCATAAAGTTCAGCTTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGTTACTCTTGATGGCTGTGATGGGAATATTGTTTCCTGCTGTGCTTCACTTTACTCACTCTGAGGTTCATGTTGGAAAATCAGAGTTATCACTATCCAGATTTAGTAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAATCAGCATAGTCTTTATAGCCCTATTGAGCAGGAGGATGGCAATAGTGAAAATGATGATGAAGAAGAAATTGAATTAACTCAATGGGAAGCAATAGGCTGGCTTGCTATTCTGACAGTATGGGTATCTGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGGGCATCTGATTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCAAGTGCCATCATGTTTGCCATGAAGGATAAGCTTGATATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAATAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACTGTGCTTGTAGTTGCATTTATGTTGCAGGAAGGAACCTCGAACTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGGTAATAACTGA 1290 0.4054 MGSAEDKIDLDSDEEIAFRPSPSSGKVQTFDFETAHVLSPGSLASSSFKRIQIRPFRSIYIVLFKAKINMLLPFGPLAILLRYLTQKHGWVFFFSLLGIAPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHHKVQLFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHVGKSELSLSRFSSCIMLVAYASYLFFQLRNQHSLYSPIEQEDGNSENDDEEEIELTQWEAIGWLAILTVWVSVLSGYLVDAIEGASDSLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGIEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTGNN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00011 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 42 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral5163g00011 429 FunFam Vacuolar cation/proton exchanger 265 421 - -
Pral5163g00011 429 Gene3D - 119 421 IPR044880 -
Pral5163g00011 429 FunFam Vacuolar cation/proton exchanger 119 258 - -
Pral5163g00011 429 NCBIfam calcium/proton exchanger 71 420 IPR004798 GO:0006816|GO:0015369
Pral5163g00011 429 NCBIfam calcium/proton exchanger 62 420 - -
Pral5163g00011 429 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016020|GO:0055085
Pral5163g00011 429 Pfam Sodium/calcium exchanger protein 278 417 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00011 Pral-Chr5163 89842 96777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00011 33 429 Antiporters AT1G55730 72.525 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00011 K07300 - rcu:8260832 679.093