Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5163g00008 ATGGAGTCATCAACCACTGTGATGGTTCTCATCTTCCTTTCAACTTCAGTATTGTTATCACTGTGCTTCCATGGCGGTGAGGCAACGGTGGTTATTGTATCTAAGGATGGAGACGGAGACTATGGAAGTATAAGTGAAGCCATATCCAAAGCTCCCAGGTTCAGTGACACACCCTACACCATCCAAGTTCGAAGCGGCACTTATAAAGAATACGTCGTCGTCCCGTCGCAAAAAATCAACATTAAGATCGTCGGCGATGGCCCTCAGCAGACCAGAATAGTCGGTTCCCATTATGGCACAACCTTAGATGGGTTCGTGGCGGAGAATATAGGGCTGGTGAACTCAGCCGGGTTAAAAGCAAGCGCCGCCGTCACCGTCCGGAACGAAGCCAACCACAGCATCTTCTTCCAATGCTCCATCGAAGGCTTGCAAGACACACTCTGGGCCGTCTCTGGCCGTCAGTTCTACAAGAACTGCGACATCTACGGCACCGTCGACTTCATCTACGGCGACGCCGCTGCCCTCTTTGAGGACTGCAACCTCTACGCTCGTTACCGGCCTTACGTCACCTTCACCGCCCAGTCACGTGAAAGTCCCGACGAGGACACTGCCTTCGCCTTCCAGCACTGCCAGTTCACGATGGCCCCGGAGGACGCCGCCATGAAGTCAAAGGTCCGTGCGACGTTGGGAAGGCCGTGGCGGCCGTATTCTACGGTGGCTGTAATTGACTCGTTCATTGACTCAATGGTGGACCCCGCGGGTTGGGAAGAGATGCAAGGTCAGCCTACCGATAAGGTGACGTATGTGGAGTTTAATAATTATGGGCCTGGGTCCAATACTTCTGGGAGAGTGAACTGGCCCGGTGTCAGGGTCCTTAGTGGCCCAGATGAGGCCCAACATTTCACAGCTTCTATTCTATTAGATGCTGATTCTTGGATCCCCCACAAGGGGGTTCCTTATAATTCATAA 969 0.5284 MESSTTVMVLIFLSTSVLLSLCFHGGEATVVIVSKDGDGDYGSISEAISKAPRFSDTPYTIQVRSGTYKEYVVVPSQKINIKIVGDGPQQTRIVGSHYGTTLDGFVAENIGLVNSAGLKASAAVTVRNEANHSIFFQCSIEGLQDTLWAVSGRQFYKNCDIYGTVDFIYGDAAALFEDCNLYARYRPYVTFTAQSRESPDEDTAFAFQHCQFTMAPEDAAMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPAGWEEMQGQPTDKVTYVEFNNYGPGSNTSGRVNWPGVRVLSGPDEAQHFTASILLDADSWIPHKGVPYNS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5163g00008 322 SUPERFAMILY Pectin lyase-like 28 320 IPR011050 -
Pral5163g00008 322 PANTHER PECTINESTERASE 31 314 - -
Pral5163g00008 322 Gene3D - 27 322 IPR012334 -
Pral5163g00008 322 Pfam Pectinesterase 31 309 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5163g00008 Pral-Chr5163 67381 71982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5163g00008 33 320 Carbohydrate Esterase AT4G02300 38.562 7.02e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5163g00008 K01051 - gmx:102665195 429.098