Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5158g00044 ATGTACATTTTACAGAATCATGAACAGTATCAGATTACTCAAGAGACCCCTCAACAGCCATCCAGTGGATCCTTGTTTCTGTTTAACAGAAGAGTTCTACGCTTTTTTCGAAAAGACGGTCATAATTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACATGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTATTATGCACACGGAGAGCAGAACCCCACTTTTCAGAGGCGAAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACATTACAGAGAAACCAGTGAGGGAAGGTCTAATTCTGGACCTGTCACACAACAGTCACCAGGCTCCTCATCTGCATTTATTCAGAGTCCTAGCTCATACGCTACCCAGAAGCTGGGGTCAACATCCACGTTTGGTGATTCATATGAACCTAATCAGAGTTTTTCCAGTCCTGGATCAGTAGAATTTACATCTGATACATTCATCAAGACTAATGGAAAAAATCACTCGGATGGAACAGAGGCGGAGTCAGGAAATTCACCTGAACTTGAGGTTACTCAGGCCTTGCGCCGACTGGAGGAGCAGTTGAGTTTGAATGAGGACATCTTCAAAGAAATTGATTCCTTCAGCAGTGAGCAGGAGAACACATATGATTCTAGTCCCCAACAAAATACAATGGCAATCAACAATCAAGATGTTACTGCAGCTTGGCCTGCACTGAGTGATCAAGGCCAATCTTATGATGGACATGGTGCCAGACAAGGCCATAATTGCTCTGATGGAATTGAGAAGACTTTATACTGGAAGGAGATGCTGGATTCATGCAAGCCCCTGTCCTCAGCCAATTTGCAGGAGAAACATGTGTACAGACCGGCTGGAAATGAAAACTCACTTTCTTCTTCGGGAAGGTTACCAATTGCCAACAAGGAAAGCAGTCACTGGATAAGCTTTGGCAGTAACAATGCTGAAAAATCTGCCTTTTCACTGACTCAAGACATTCATGGAGTGGGATTTTCTCCATATTCTTCTATAGAAACTCAAGAAGCTAATTTGGACTATGCATCATTTTTTGACCAAAACCAAGTTGAAGCTCCTCTGGATGTAGATTTAAGTTTGACTGTTGCACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGGATGGGGTTATGCTAATGAAGCCACGAAGGTTATCATTGTGGGATCATTTCTTTGTCCTCCTACAAGTTCTACCTGGGCTTGCATGTTTGGTGATGTTGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGTTGCGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTCTATGCATTACTTCTGGGAATCGGGAGTCCTGCAGTGAAGTTCGTGAGTTTCAGTATCGCAGTAAGGATAGTTGCCCTCACTGCAATCCACTGGAAGCAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCGCAGATAATTCTTGCTGATTCTTCTACGACGGAATCTGGAAATTATGAACTGGATAAACAGAAATTTGATGATGATTCGTGGAGCCATGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGCTGTCGTGGCTTTCTTCCAGATCCCACAAAAGAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGCTGCTGGGTTGGGTTTTGAGTGGGCTTTGAATCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAGTGGATGGACTGCCCTACACTGGGCTGCACGCTTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCCTCTGGTGCCTCTGCTGGAGCAGTGACAGATCCAACTGCCCAAGATCCAACCGGTAAAACAGCTGCTTCTATCGCAGCCAACAGTGGGCATAAGGGTCTGGCAGGTTATCTTTCTGAGGTATCTCTAACAAGCCACTTATCTTCCCTCACCCTGGAAGAAAGCGAGCTGTCTAAAGGTTCAGCTGAGCTTGAAGCAGAGTTAACTGTAAGTACTGTCTCCACGGAGCATCTAACAGCCAGTGAAGATCAGATTTCACTCAAACATACTTTGGCTGCTGTGCGTAATGCAGCTCAGGCAGCTGCACGTATACAGTCTGCTTTTCGTGCTCATTCCTTTAGGAAAAGGATAGAGAGGGAAGCTGCCATTTCTGCAGCAGGTATGGATCGATACGGTATCAGTGATAACATTCCAGAGCTTTCTGCCATGTCAAAACTTGCCTCTCATAATTCACGTGATTACCATTCAGCCGCCATATCAATTCAGAAGAAATATCGAGGATGGAAAGGCCGCAAAGATTTTCTAGCATTACGTAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCACTACAAGATTATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAAGAGGAAAGGAGCTGGTTTACGAGGTTTTCGACAGGAGAGAAACTCAACTGATGAAAATGAAGATGAAGACATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGAAGCAGTTGAACAGGCTGTTTCACGGGTGTTGTCCATGGTTGATTCTCCAAATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCTAAGGCTGAAGTCGGCAGCACAAGTCAAGGAGTACCGTTATCTTTTCTGCAGGAGGCTTCCAATATGGAAGATGATGACTTAAACCAGCTTCTCTAG 2835 0.4395 MYILQNHEQYQITQETPQQPSSGSLFLFNRRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRSNSGPVTQQSPGSSSAFIQSPSSYATQKLGSTSTFGDSYEPNQSFSSPGSVEFTSDTFIKTNGKNHSDGTEAESGNSPELEVTQALRRLEEQLSLNEDIFKEIDSFSSEQENTYDSSPQQNTMAINNQDVTAAWPALSDQGQSYDGHGARQGHNCSDGIEKTLYWKEMLDSCKPLSSANLQEKHVYRPAGNENSLSSSGRLPIANKESSHWISFGSNNAEKSAFSLTQDIHGVGFSPYSSIETQEANLDYASFFDQNQVEAPLDVDLSLTVAQKQKFTIKEVSPGWGYANEATKVIIVGSFLCPPTSSTWACMFGDVEVPVEIIQDGVIRCEAPSHLPGKVTLCITSGNRESCSEVREFQYRSKDSCPHCNPLEAESTRSPEELLLLVRFAQIILADSSTTESGNYELDKQKFDDDSWSHVIEALLVGSGTSSGTVDWLLEELLKDKLLSWLSSRSHKRNEETGSSLSKKEQGIIHMAAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLIASGASAGAVTDPTAQDPTGKTAASIAANSGHKGLAGYLSEVSLTSHLSSLTLEESELSKGSAELEAELTVSTVSTEHLTASEDQISLKHTLAAVRNAAQAAARIQSAFRAHSFRKRIEREAAISAAGMDRYGISDNIPELSAMSKLASHNSRDYHSAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYKIICWVVGFFDKAVLRWKRKGAGLRGFRQERNSTDENEDEDILKVFRKQKVDEAVEQAVSRVLSMVDSPNARQQYHRMLEKFRQAKAEVGSTSQGVPLSFLQEASNMEDDDLNQLL 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5158g00044 944 Pfam CG-1 domain 2 102 IPR005559 GO:0003677
Pral5158g00044 944 SUPERFAMILY Ankyrin repeat 579 671 IPR036770 -
Pral5158g00044 944 ProSiteProfiles IQ motif profile. 728 757 IPR000048 GO:0005515
Pral5158g00044 944 ProSiteProfiles Ankyrin repeat profile. 610 642 IPR002110 GO:0005515
Pral5158g00044 944 Gene3D - 784 831 - -
Pral5158g00044 944 FunFam Calmodulin-binding transcription activator 2 379 473 - -
Pral5158g00044 944 SMART CG_1_2 1 104 IPR005559 GO:0003677
Pral5158g00044 944 Gene3D - 516 675 IPR036770 -
Pral5158g00044 944 FunFam Calmodulin-binding transcription activator 4 isoform A 492 675 - -
Pral5158g00044 944 ProSiteProfiles Ankyrin repeat region circular profile. 610 636 - -
Pral5158g00044 944 Pfam IQ calmodulin-binding motif 786 805 IPR000048 GO:0005515
Pral5158g00044 944 Pfam IQ calmodulin-binding motif 809 829 IPR000048 GO:0005515
Pral5158g00044 944 SMART ANK_2a 649 678 IPR002110 GO:0005515
Pral5158g00044 944 SMART ANK_2a 610 639 IPR002110 GO:0005515
Pral5158g00044 944 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 916 - -
Pral5158g00044 944 CDD IPT 385 470 - -
Pral5158g00044 944 ProSiteProfiles IQ motif profile. 808 832 IPR000048 GO:0005515
Pral5158g00044 944 SUPERFAMILY E set domains 385 469 IPR014756 -
Pral5158g00044 944 FunFam Calmodulin-binding transcription activator 2 784 832 - -
Pral5158g00044 944 Pfam IPT/TIG domain 385 468 IPR002909 -
Pral5158g00044 944 SMART iq_5 807 829 IPR000048 GO:0005515
Pral5158g00044 944 SMART iq_5 727 749 IPR000048 GO:0005515
Pral5158g00044 944 SMART iq_5 784 806 IPR000048 GO:0005515
Pral5158g00044 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 834 IPR027417 -
Pral5158g00044 944 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Pral5158g00044 944 MobiDBLite consensus disorder prediction 103 186 - -
Pral5158g00044 944 Pfam Ankyrin repeats (3 copies) 583 670 IPR002110 GO:0005515
Pral5158g00044 944 Gene3D Immunoglobulins 379 473 IPR013783 -
Pral5158g00044 944 ProSiteProfiles CG-1 DNA-binding domain profile. 1 109 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5158g00044 Pral-Chr5158 781725 792989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5158g00044 1 943 CAMTA Transcription Factor Family AT1G67310 51.848 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pral5158g00044 CG-1 1.8e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5158g00044 K21596 - gmx:100786880 1263.44