Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5158g00040 | ATGAGTTTGCTCTATGTAGTTGGATTTGGCCTAAAGTTGGGGCATCTACTTTTGGCGCTGTGTTGCTGGATTGTATCAATCATATACATGAACTGGTTCAACAACGGAGGAATTATGGAAACCGAGGTTGGTTTTCTTGGTGGCGGCGGCAAGATGTGGCTCAAGTGGTGGGATAAGATCTCAGGCAATAGTCGTAAAATTCATCAACACTACTACCAGTGTATTGGGTCCAAGAAAGTTCGGAGAACTCTGTGGAGAAAGCTTTTGCTGATATGGGTACTGGGCTGGGTCGTGGTATCTTTTTGGATCTTCCTCTTCATGACCTTGCAAGCTACTGAGAAGAGGAAAGAGACTCTGGCAAGCATGTGTGATGAAAGGGCTAGGATGCTTCAGGATCAGTTTAATGTTAGTATGAACCATATCCAAGCCATGTCAATACTCATCTCAACCTTCCACCATGCCAAGTCCCCTTCTGCCATCGATCAGAGAACATTTGCTAGGTACACAGAGCGAACTGCTTTTGAGAGGCCCCTTACTAGTGGTGTTGCTTATGCTGTGAGGGTGCTTCATTCTGAAAGGGAACAATTCGAGAAGCAACAAGGTTGGACCATTAAGAGGATGGATACCCTTGAGCAGAACCCCATTCATGAGGATGACTATGCCCCTGAGGCATTGGAGCCTTCCCCAGTTCGAGAAGAATATGCTCCTGTCGTTTTTGCACAGGAAACCATTTCCCATGTCATTTCTGTTGATGTGCTGTCCGGAAAGGAAGATCGTGAAAATGTTTTGCGTGCTAGAGAGTTAGGGAAAGGAGTTTTAACTGCTCCTTTTAGGCTGCTCAAAACAAATCATCTTGGAGTTATCCTCACCTTTGCAGTTTACAACACAGATCTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACAAATGGGTATCTTGGTGGCGTCTTTGATATTGAGTCATTGGTTGAAAAATTACTTCAACAACTAGCTAGCAAGCAAACTGTGATTGTTAATGTGTATGATACTACTAATCATACCCACCCTATTCCAATGTATGGTTCAAACGTATCAGATGATGGATTCTATCATGTTAGTTCCCTGAACTTTGGAGATCCTTTTCGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCATGGCCCTGGTTGGCAATAGCCACATCAATTGGCATCCTTGTTATTGCGCTCCTTGTAGGTCATATTTTTCATGCTACTGTGAATCGAATTGCTAAGGTGGAGGATGATTACCGTGAGATGATGGAACTTAAAAAACGAGCCGAGGCAGCTGATGTTGCAAAATCCCAGTTTCTGGCCACCGTTTCTCATGAGATCCGAACGCCAATGAATGGTGTTCTTGGAATGTTGCACTTGCTTATGGACACAGATCTAGATGTAACACAGAAAGAATATGTCAGAACTGCACAGGGTAGTGGAAGAGCTCTAGTGTCGCTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTTGAGCTTGAGGCAGTGCTATTTGACATACGAGCAGTTTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTCAAGAGAAGGGAGTAGAGTTGGCAGCGTATGTCTCAGATAAGGTTCCTGAACAGCTTGTGGGTGATCCAGGAAGGTTTCGGCAAATAATTACAAATCTCATGGGCAATTCAATTAAGTTCACAGAGAAAGGGCACATATTTGTCACTGTCCATCTTATTGAGGAAGTTGTCAATTCAATCGAAGTTGCAACATCAAAGAATACCCTGAGTGGCTTTCCTGTTGCTGATAGATGTCAAAGTTGGAAAGGATTCAATTCTGTCAGTCAAGAAGGACCTCTGGGTTCTTTCTCATCTTCCTCCTCTGATCGCATTACTCTCATTGTATCTGTTGAAGATACAGGCGAAGGAATTCCTCAAGAAGCCCAATCCCGCATCTTTACCCCATTCATGCAGGTTGGTCCGTCTGTCTCCAGGAAACATGGGGGAACAGGCATTGGGCTGAGCATCAGCAAGTGCCTGGTTGGCCTCATGCACGGGGAAATTGGATTTGTGAGCTTTCCAAAGATTGGATCTACTTTCACATTTACTGCTGTCTTCACCAATGAATCCCCTATTTCAACTGAGGGTCAAACTCAGCAAATTAACAACCAACCTCACCTTGCATCCTCAGAATTTCAGGGCATGACCGCACTTGTTATAGACCCTAAACCTGTCAGAGCTAAAGTGTTGAGATATCACATTAAACGGCTTGGCATTCATGTTGAAATAGCTTCGGATTTAAATCAAGGTTTGTCTGTCATAAGCAATGTCGATATGATCTTAGTTGAACACGAAGTCTGGGATAGAGATTCTGGTGTTTCATCTCAGTTTATCAGTAACGTGAGGAAAATTGATCGTAGGGTTCCTCCAAATCTGTTCGTTCTTGTTAATTCTAGTAGCTCTTCCAGAACAAGTTCCATAACATTTGGTGTCAATAGTCCAACTGTCATTGTAAAACCTCTGAGAGCAAGCATGCTTGCTGCTACATTACAGCGAGCCATGGGTGTGGGGAACAGGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTCCGCCATCTTTTGCGTGGGAGAAAAATCCTTATTGTAGACGACAATAGTGTGAACCGAACAGTGGCAGCTGGTGCTTTAAAAAAGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGACAAGATGCCATCTCTATGCTGGAGCCGCCCCATCAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACCAGGAGGATTCGGGAGATGGAACGTGTAAGCAGAGGAGAACTGCCTGTAAACAGAGGAGAAGTCCCTGTGGAGACCTTGGAGAATAATTCAAACTGCCACATGCCCATTTTGGCTATGACTGCAGACGTGATTCAGGCAACGCATGAGGAATGCCTAAGGTGTGGAATGGATGGATATGTTTCGAAACCATTTGAAGCTGAGCAGCTTTATCGGGAAGTTTCACGGTGTTTCCAATCCACTTCATGA | 3093 | 0.4407 | MSLLYVVGFGLKLGHLLLALCCWIVSIIYMNWFNNGGIMETEVGFLGGGGKMWLKWWDKISGNSRKIHQHYYQCIGSKKVRRTLWRKLLLIWVLGWVVVSFWIFLFMTLQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQNPIHEDDYAPEALEPSPVREEYAPVVFAQETISHVISVDVLSGKEDRENVLRARELGKGVLTAPFRLLKTNHLGVILTFAVYNTDLPSNATPNERIQATNGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIPMYGSNVSDDGFYHVSSLNFGDPFRKHEMHCRFKQKPPWPWLAIATSIGILVIALLVGHIFHATVNRIAKVEDDYREMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHLLMDTDLDVTQKEYVRTAQGSGRALVSLINEVLDQAKIESGKLELEAVLFDIRAVLDDVLSLFSEKSQEKGVELAAYVSDKVPEQLVGDPGRFRQIITNLMGNSIKFTEKGHIFVTVHLIEEVVNSIEVATSKNTLSGFPVADRCQSWKGFNSVSQEGPLGSFSSSSSDRITLIVSVEDTGEGIPQEAQSRIFTPFMQVGPSVSRKHGGTGIGLSISKCLVGLMHGEIGFVSFPKIGSTFTFTAVFTNESPISTEGQTQQINNQPHLASSEFQGMTALVIDPKPVRAKVLRYHIKRLGIHVEIASDLNQGLSVISNVDMILVEHEVWDRDSGVSSQFISNVRKIDRRVPPNLFVLVNSSSSSRTSSITFGVNSPTVIVKPLRASMLAATLQRAMGVGNRGNPRNGELPSLSLRHLLRGRKILIVDDNSVNRTVAAGALKKYGADVVCVNSGQDAISMLEPPHQFDACFMDIQMPEMDGFEATRRIREMERVSRGELPVNRGEVPVETLENNSNCHMPILAMTADVIQATHEECLRCGMDGYVSKPFEAEQLYREVSRCFQSTS | 1030 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5158g00040 | 1030 | SUPERFAMILY | CheY-like | 737 | 867 | IPR011006 | - | |
Pral5158g00040 | 1030 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 497 | 710 | IPR036890 | - | |
Pral5158g00040 | 1030 | Gene3D | CHASE domain | 160 | 389 | IPR042240 | - | |
Pral5158g00040 | 1030 | CDD | HATPase_EvgS-ArcB-TorS-like | 560 | 713 | - | - | |
Pral5158g00040 | 1030 | CDD | HisKA | 443 | 504 | IPR003661 | GO:0000155|GO:0007165 | |
Pral5158g00040 | 1030 | SUPERFAMILY | CheY-like | 883 | 1026 | IPR011006 | - | |
Pral5158g00040 | 1030 | Pfam | Response regulator receiver domain | 888 | 956 | IPR001789 | GO:0000160 | |
Pral5158g00040 | 1030 | SMART | REC_2 | 886 | 1022 | IPR001789 | GO:0000160 | |
Pral5158g00040 | 1030 | FunFam | Histidine kinase 4 | 160 | 389 | - | - | |
Pral5158g00040 | 1030 | Pfam | His Kinase A (phospho-acceptor) domain | 443 | 508 | IPR003661 | GO:0000155|GO:0007165 | |
Pral5158g00040 | 1030 | Gene3D | - | 507 | 717 | IPR036890 | - | |
Pral5158g00040 | 1030 | CDD | REC_hyHK_CKI1_RcsC-like | 888 | 1022 | - | - | |
Pral5158g00040 | 1030 | Gene3D | - | 411 | 506 | - | - | |
Pral5158g00040 | 1030 | SMART | CHASE_2 | 156 | 357 | IPR006189 | - | |
Pral5158g00040 | 1030 | PRINTS | Bacterial sensor protein C-terminal signature | 658 | 668 | IPR004358 | GO:0016310|GO:0016772 | |
Pral5158g00040 | 1030 | PRINTS | Bacterial sensor protein C-terminal signature | 675 | 693 | IPR004358 | GO:0016310|GO:0016772 | |
Pral5158g00040 | 1030 | PRINTS | Bacterial sensor protein C-terminal signature | 640 | 654 | IPR004358 | GO:0016310|GO:0016772 | |
Pral5158g00040 | 1030 | CDD | PRTases_typeI | 841 | 915 | IPR000836 | - | |
Pral5158g00040 | 1030 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 428 | 509 | IPR036097 | GO:0000155|GO:0007165 | |
Pral5158g00040 | 1030 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 555 | 713 | IPR003594 | - | |
Pral5158g00040 | 1030 | ProSiteProfiles | Histidine kinase domain profile. | 450 | 715 | IPR005467 | - | |
Pral5158g00040 | 1030 | Gene3D | - | 881 | 1029 | - | - | |
Pral5158g00040 | 1030 | Gene3D | - | 736 | 863 | - | - | |
Pral5158g00040 | 1030 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 121 | 1019 | - | - | |
Pral5158g00040 | 1030 | Gene3D | - | 107 | 159 | - | - | |
Pral5158g00040 | 1030 | SMART | HisKA_10 | 443 | 508 | IPR003661 | GO:0000155|GO:0007165 | |
Pral5158g00040 | 1030 | ProSiteProfiles | Response regulatory domain profile. | 743 | 861 | IPR001789 | GO:0000160 | |
Pral5158g00040 | 1030 | ProSiteProfiles | Response regulatory domain profile. | 887 | 1026 | IPR001789 | GO:0000160 | |
Pral5158g00040 | 1030 | SMART | HKATPase_4 | 555 | 715 | IPR003594 | - | |
Pral5158g00040 | 1030 | Pfam | CHASE domain | 159 | 355 | IPR006189 | - | |
Pral5158g00040 | 1030 | FunFam | Histidine kinase 4 | 415 | 506 | - | - | |
Pral5158g00040 | 1030 | Coils | Coil | 420 | 440 | - | - | |
Pral5158g00040 | 1030 | ProSiteProfiles | CHASE domain profile. | 156 | 382 | IPR006189 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5158g00040 | Pral-Chr5158 | 761363 | 767955 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5158g00040 | 1 | 1030 | Miscellaneous Gene Families | AT1G27320 | 67.871 | 0.0 | 1396 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Pral5158g00040 | CHASE | 2.1e-37 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5158g00040 | K14489 | - | gmx:100801546 | 1615.51 |