Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5158g00020 ATGGCGGAAGAAGGGAAAAATAGCTCGATGCGACCAGAATTTCCGACTGGTCGAGTGAAGAAAATCATGAAGCTTGATCCAGAAGTCCAGAGAGTAAGTTCAGAAGCCTTGTTCCTGGTATCATGCTCCACCGAGCTCTTCCTCCGATTCCTGGCTGAAAAGTCTGCCCAAGTTGCCATCGAGAAGAAGCGCAAGACTGTGAAGCTTGAACACTTAAGAATGTCCGTCAAGAGGCACCAACCGACCAGCGATTTTCTGCTTGATTCGCTTCCTCTGCCCTCTCGGCCCGTTGATCGCCCGACCAAAGATCGGAGGCAATCTGGCCCTGATGGTGATAAGCTGCCTCCACCTGGCACTCGACGTATCGATCATTTCTTTCGAAAGCCAGAAGAAGAAGCACCAGAACCTAGAGACGAGCCTTAG 423 0.5106 MAEEGKNSSMRPEFPTGRVKKIMKLDPEVQRVSSEALFLVSCSTELFLRFLAEKSAQVAIEKKRKTVKLEHLRMSVKRHQPTSDFLLDSLPLPSRPVDRPTKDRRQSGPDGDKLPPPGTRRIDHFFRKPEEEAPEPRDEP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5158g00020 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Pral5158g00020 140 SUPERFAMILY Histone-fold 5 91 IPR009072 GO:0046982
Pral5158g00020 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Pral5158g00020 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 11 102 - -
Pral5158g00020 140 MobiDBLite consensus disorder prediction 78 140 - -
Pral5158g00020 140 MobiDBLite consensus disorder prediction 97 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5158g00020 3 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 63.492 2.26e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral5158g00020 CBFD_NFYB_HMF 3.3e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5158g00020 - - qsa:O6P43_023858 178.333