Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5157g00026 ATGCGTCCTTCAAAGTCACGTCAAGTCCATCCCACCCCGGCTCAGGGTGCCCGCCTCGACCCTAAAATCTGGCGAGCATGCGCCGGTGGATCCTTTCGCATCCCTCCTCTTCATTCTAGGGTTTATTACTTCCCTCAGGGCCATATCGAGCATGCCTCGTCGGCTCCTCAATACCTTAACCCTCTCATCTTCTACAGGCCTTTCATTCCCTGTCGCGTCTCCGCTGTTGAATTTCTTGCTGACCCTGTCACTGATGAGGTATTTGCCAAGCTTTCGCTCCTTCCTTTGAGTGATGGCAACTCTGATCACTTTGGCGATTCCTTGGTAGCGCCGGACGATGACAAGATCGTGTCGTTCGCGAAAGTTCTGACGCCTTCTGACGCGAACAATGGCGGTGGATTCTCTGTTCCTAGGTACTGTGCTGACTCCATCTTTCCGCCTCTGAACTTCCAGGTCGACCGACCCACCCAGACATTGTACGTGACGGATGTTCACGGTAACGTCTGGGAATTTCGCCACATTTATCGGGGCACACCGAGGCGGCACTTGCTCACTACTGGCTGGAGTAAATTTGTCAATAATAAGAAGTTGGTTGCTGGTGATTCGGTGGTTTTCATGAGGAACTCCAGAGGGAAGATGTTCGTCGGGATTCGCAGAGCTTTGCGACTTGCTAAATTAACTGCGGTCGATTGCTCCATATGGTCTTCCCAACTTGGTGGGCTGAGAAATAAGCCTGAGGGGGAGCAGCAACGAGATGGCTATGTAGGTCCCAGAGGGAAAGAAAGGTTTTCAAGGGACGGGGCGGGGAAATTATCGGCTAAGGAAGTTTCCGATGCTGCAGAATTGGCAGCGCAAAACATGCCATTTGAGGTTGTGTATTATCCAAGGGTGGGCTGGTCGGACTTTGTGGTGAAGGCGGAAGTTGTGGAGAAAGCTTGGAATGTCGCATGGGCTTCCGGAATGAGAGTTAAAATGGCAATGGAGACAGAGGATTCGTCCAGGATCACCTGGTTTCAGGGGACAGTATCTTCTGCATCTGCTCCTAACAATGGGCCTTGGCGGGGTTCTCCATGGCGTATGCTTCAGATTATGTGGGATGAACCAGAAGTCTTGCAGAATGCAAAGCGAGTGAGCCCGTGGGAGGTTGAACTTGTTTCCTCTGCACTTCCCCCTAATACGGTATTCCCTCCTGCAAAAAGGTTTAGGGCTGCTCAGTATTGCGGCGCGGCAACTGATAGAGAGGGAGACCCTTTCTTTTCTATGACAGGTTTGACTAATTCAACAATGGGGCAATTGAACCAATCATTGTTGAATTACAATACTATTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTATCAAGTCTCTCCAACTTTGAAACTGGTAATTCTCATCTGTATATCGTTAATACAGCTGGTAACATGGTACCCAAGATGAAAACTTCTATGTCAACAGAGCCAAATATTGACAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCAGAGTAGTTTGCATGGCTCTGGCGCAGAATTCGCTGGGACACGAGGCTGCTGCATGACAAAACAGGGTGCAACTTCAATTCAGCTATTCGGTAAGCTTATTCAATTGGAACAGCCCGTTGAAAGTGGTTCCCATGCTTTTGGGTGCACGGGAGACGAGGGCAGTAATGGCGGCAATGAGACTGAAGGCGTTGACCAACCATTGGGCCATTCTCTAACCAACAGTTGCTCGCTTGGCTTGATGTCCAATGCCAATGAGCATTCTGGGCAGTAG 1785 0.4997 MRPSKSRQVHPTPAQGARLDPKIWRACAGGSFRIPPLHSRVYYFPQGHIEHASSAPQYLNPLIFYRPFIPCRVSAVEFLADPVTDEVFAKLSLLPLSDGNSDHFGDSLVAPDDDKIVSFAKVLTPSDANNGGGFSVPRYCADSIFPPLNFQVDRPTQTLYVTDVHGNVWEFRHIYRGTPRRHLLTTGWSKFVNNKKLVAGDSVVFMRNSRGKMFVGIRRALRLAKLTAVDCSIWSSQLGGLRNKPEGEQQRDGYVGPRGKERFSRDGAGKLSAKEVSDAAELAAQNMPFEVVYYPRVGWSDFVVKAEVVEKAWNVAWASGMRVKMAMETEDSSRITWFQGTVSSASAPNNGPWRGSPWRMLQIMWDEPEVLQNAKRVSPWEVELVSSALPPNTVFPPAKRFRAAQYCGAATDREGDPFFSMTGLTNSTMGQLNQSLLNYNTIPAGMQGARQDLSSVSSLSNFETGNSHLYIVNTAGNMVPKMKTSMSTEPNIDSSQSNSLSPESQSSLHGSGAEFAGTRGCCMTKQGATSIQLFGKLIQLEQPVESGSHAFGCTGDEGSNGGNETEGVDQPLGHSLTNSCSLGLMSNANEHSGQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5157g00026 594 MobiDBLite consensus disorder prediction 242 268 - -
Pral5157g00026 594 MobiDBLite consensus disorder prediction 245 268 - -
Pral5157g00026 594 MobiDBLite consensus disorder prediction 548 594 - -
Pral5157g00026 594 SUPERFAMILY DNA-binding pseudobarrel domain 105 227 IPR015300 -
Pral5157g00026 594 Gene3D - 116 221 IPR015300 -
Pral5157g00026 594 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 546 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pral5157g00026 594 SMART B3_2 119 221 IPR003340 GO:0003677
Pral5157g00026 594 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Pral5157g00026 594 MobiDBLite consensus disorder prediction 558 594 - -
Pral5157g00026 594 Gene3D - 317 389 - -
Pral5157g00026 594 FunFam Auxin response factor 117 221 - -
Pral5157g00026 594 CDD B3_DNA 118 219 IPR003340 GO:0003677
Pral5157g00026 594 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Pral5157g00026 594 MobiDBLite consensus disorder prediction 481 512 - -
Pral5157g00026 594 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5157g00026 Pral-Chr5157 129024 132803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5157g00026 18 566 B3 DNA Binding Superfamily AT1G77850 49.466 1.53e-179 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pral5157g00026 B3 8.7e-24 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5157g00026 - - qsa:O6P43_019702 749.199