Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5157g00020 ATGAGCAACCTGAAAACGCTATGTAGACCGCAACCACTGTTCTCCTTCATTAGTTGCAGACAACTATTTCGAGCTAGGGCTTCATTTCGAAGCCCTAATTGCAAGCCTCGTTCACCATCGGCCTCAATATACTCTACATGGTTGGATCCCCCGGTTTCGAGCAGAATTGAGTTTGGGTTTCGCGGCAGCCAGAGGAGAACCGTGGTCAAGGCATCCAATTGGACAGAGCAAAAATCCCCATACGAAACTCTTGAATTAGAACGAGATGCTGATGAGGATCAGATAAAGAATGCTTATAGACGCTTGGCCAAATTTTATCACCCAGATGTCTATGATGGCAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCAAGGTTCATAAAGATTCAAGCTGCTTATGAATTACTTATCGACGACGAGAGACGGCGGCAGTATGATATGGATAACCGAGTGAACCCAATGAAGGCATCCGAGGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGAGGTGATATGGCTATTGCTGCTTGGGCAGAGCAGCAACAGCGTGAGTTAAATATCCGTGCACGTAGTCTATCTCGTTCAAAGATTGATCCAGAAGAAGAGAGGAAAATCCTGGCAAGAGAAAAGAAAGCTTATGCTGAAAATTTCAACAATACCCTTAAGAGGCATACGCTTGTATTAAAGAAAAGAGATTTAATGCGAAAAAAGGCTGAGGAAGAAAGAAAGAAGACTATCACTCGGCTGTTGGCTGAAGAGGGTCTTGAGCTTGATTCAGATGGTGATGATGCACTGTAG 816 0.4461 MSNLKTLCRPQPLFSFISCRQLFRARASFRSPNCKPRSPSASIYSTWLDPPVSSRIEFGFRGSQRRTVVKASNWTEQKSPYETLELERDADEDQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDDERRRQYDMDNRVNPMKASEAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRSKIDPEEERKILAREKKAYAENFNNTLKRHTLVLKKRDLMRKKAEEERKKTITRLLAEEGLELDSDGDDAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5157g00020 271 Coils Coil 81 101 - -
Pral5157g00020 271 Gene3D DnaJ domain 66 179 IPR036869 -
Pral5157g00020 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Pral5157g00020 271 CDD DnaJ 80 139 IPR001623 -
Pral5157g00020 271 SMART dnaj_3 78 142 IPR001623 -
Pral5157g00020 271 FunFam Chaperone protein dnaJ 65 170 - -
Pral5157g00020 271 Pfam DnaJ domain 80 147 IPR001623 -
Pral5157g00020 271 PANTHER CO-CHAPERONE PROTEIN DJLA 62 254 - -
Pral5157g00020 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Pral5157g00020 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Pral5157g00020 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Pral5157g00020 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Pral5157g00020 271 SUPERFAMILY Chaperone J-domain 73 148 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5157g00020 Pral-Chr5157 106191 109230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5157g00020 71 147 C2H2 Transcription Factor Family AT1G74250 37.662 1.36e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5157g00020 - - gmx:100808285 397.512