Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5157g00018 ATGAGTTCTCCATCAACTCAACTTGTCATCTCAAAAAGGATGGGCATATATGAGCCATTCCAGCAAGTTAGCATGTGGGGGGACAACTTTAAAGTTGAAAATAGCCTCAATTCAGGTCCTTCCCAGATATTCATGGTGAACCCTATCACAGAGCCCAAGGCTGAGTATATTCCCCATGAGTCAACTGGACCCTCGGGAGATGATCAAGAGACCAATACTGCTGTCAGCAAGGTGCTAAGACGCTTACAACAAAATCGGGAAGCAGCTCGAAAAAGTCGTCAAAGGAAAAAGGCCTATGTCCAACAATTAGAATCAAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAAAAAGCAGGGTCTGTATATGGGCGGAGCAGTAGATGCTACTTATATAGGATCATCTGGAACAATAAACCCAGGGATTGCCGCTTTTGAGATGGAATATGGTCAATGGGTTGAAGAGCAACACAGACAAAGTGCTAAACTTAGAAACGCAGTGCAAACTGAGTCATCTCCTGGGGAGCTCCATCAACTGGTTGAGAGTATCTTGAATCATTACTCAAATCTTTTCAGGATGAAAGCTGACGCTGCAAAGGCTGATGTCTTCTACTTAATCTCTGGAGTTTGGAAGGCATCCGTGGAACGCCTCTTCCTCTGGATCGGAGGATCCCGCCCCTCTCAGCTTCTTAATATCATCGTGCCACAGGTGGAGAATTTGACGGATCAACAGATAGCGAGTTGCACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTGGAGAAACTGCAGCAGAGTCTGGTCCACAACATGGCAGCCGATGCATTAGGAAGCTTCGGGTTTCCGATGACTTCTGCCATGGAGAAAATCGAAGCACTAGAGGGTTTTGTAAGCCAGGCAGATCACCTTCGACAACAAACCTTGCAGCATATGTCTCGGATCCTGACAGTCCAGCAAGCAGCTCAAGGCTTGCTGGCCTTAGGCGAATACTTTCAGCGTCTTCGTGCTCTTAGTTCTCTTTGGTCAGCTCGTCCAAGCGATCCTACGTTCCAAACTTGA 1089 0.4683 MSSPSTQLVISKRMGIYEPFQQVSMWGDNFKVENSLNSGPSQIFMVNPITEPKAEYIPHESTGPSGDDQETNTAVSKVLRRLQQNREAARKSRQRKKAYVQQLESSRLKLMQLELEIEKAKKQGLYMGGAVDATYIGSSGTINPGIAAFEMEYGQWVEEQHRQSAKLRNAVQTESSPGELHQLVESILNHYSNLFRMKADAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVENLTDQQIASCTKLRQSSQQAEDALSQGLEKLQQSLVHNMAADALGSFGFPMTSAMEKIEALEGFVSQADHLRQQTLQHMSRILTVQQAAQGLLALGEYFQRLRALSSLWSARPSDPTFQT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5157g00018 362 ProSiteProfiles DOG1 domain profile. 146 354 IPR025422 GO:0006351|GO:0043565
Pral5157g00018 362 Pfam Seed dormancy control 165 238 IPR025422 GO:0006351|GO:0043565
Pral5157g00018 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 356 - -
Pral5157g00018 362 FunFam BZIP family transcription factor 76 125 - -
Pral5157g00018 362 Gene3D - 76 125 - -
Pral5157g00018 362 Coils Coil 96 123 - -
Pral5157g00018 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 110 IPR004827 GO:0003700|GO:0006355
Pral5157g00018 362 SUPERFAMILY Leucine zipper domain 77 110 IPR046347 GO:0003700|GO:0006355
Pral5157g00018 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Pral5157g00018 362 Pfam bZIP transcription factor 77 107 IPR004827 GO:0003700|GO:0006355
Pral5157g00018 362 SMART brlzneu 73 133 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5157g00018 Pral-Chr5157 101327 105743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5157g00018 2 359 Calmodulin-binding Proteins AT1G77920 56.533 7.57e-138 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5157g00018 DOG1 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5157g00018 K14431 - gmx:100775882 502.286