Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00034 ATGGAACCTTCTACGGCGCAGACGGGGGGAGAACTCCGAGATCGCAGAGCTGATGCTCTTGGAGACCTTCGAGTCCTCCCCGATGAAATCCTCTGCGCAATTTTAGAGGAACTCACTCCTCGAGATGTTGCTCGCCTCGCTTGCGTTAGCAGCGTAATGTACATACTGTGCAATGAAGAAACCCTATGGATGATTTTGTGCCTTAAAGGAGCGTCTGGTTTACTTCAGTACAAAAGCTCTTGGAAGAAAACTGCTCTGAATCGTGAGAATTTGCCAGGCAAATACATTGAATGTAACAGAGGATTTCTGCATTTTGATGGGTTTAATTCAGTATATTTGTATAGAAGATTATACAGGTGTCATACAAAGTTGGACACGTTTTATGTGGACAATGGAAATGTGGAAAGAAGGGGCGATGTCTCTCTAAAAGACTTCCGTGATGAGTATGATGGGAAGAAACCGGTCATGCTTACTGGATTGGCTGATGCGTGGCCTGCAAGGCATAAATGGACAACTGACCATCTGTTGCTAAACTACGGAGATGTATCATTTAAGATTTCCCAAAGGAGTTCTCGAAAGATCTTGATGAAGTTTAAGGATTATGTTTCCTACATGAAACTTCAGCATGATGAAGATCCACTGTACATTTTTGATGAAAAGTTTGGTGAAGTTGCACCCAGCTTACTGAAGGATTACTGTGTGCCTGATTTGTTTCAAGAAGACTACTTTGATATTTTAAATGAAGATAAACGACCACCCTACAGGTGGCTTATTATTGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTTACTAGTGCATGGAATACTCTTCTTTCTGGTCGCAAAAGGTGGGCATTATATCCTCCAGGAAAGGTGCCTTTGGGAGTCACAGTGCATGTCAATGAAGATGATGGTGATGTTAACATTGAGACACCATCATCACTGCAGTGGTGGCTGGACTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTTCTAAACTTGGAAACAACCATCGCTGTCACACAGAATTTTGTGAATTATAGTAACTTTGAATTTGTATGTTTGGATATGGCCCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTAGCCCTTGATGATGATGGGTATGAAGATGTCAAAAAGAATATGTTCTGTGACGAACAGAATTCAAGTTATTCCATTCTGTCGAGGAGGGAGAAAAGAGCCAGAAATGATGAAGATGGAGATGATTTGAATAATGAAAGAACAAAATATGGTGCATCTAGAAACTATAATGTATGGAAAGATGGATTTTCTTATGATATAAATTTCTTATCCATGTTTTTGGATAAAGATAGGGACCACTACAGGTCCCCTTGGAGCTCAGGCAACAGCATTGGCCAACGAGAACTAAGAGAATGGTTATCCAAACTTTGGGTTGGAAAACCAGAGATGAGAGAGCTAATATGGAAGGGAGCATGTATTGCACTAAATGCTGACAAGTGGTCCAAATGCCTGTCTGAAATTTGTTCCTTGCACAATATGTCCTCTCCCCTTGATGATGAAAAGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTTGTGGGAAACACGGTTGTCAAAATCTTTGTTGAAGGAGGGCTAGAAGCTGCACTTCATGGTTTAGGCACAGAGCTCCAGTTCTACAATATATTACATGAAGTCAACTCTCCTCTTAGGAATCATATTCCTGAGGTTTTGGCCAGTGGGATTCTTTATCTTGACGATGGAACTTATACCAATCTGCCTTGGGATGGAAAGGGAGCCCCTGATATTGTCATCAAGAGTGATCTAACCAGGCAAAAATTTGGAGTTGATGATTTCTTATTTGGTGTATGGGACAAGATGCAGTTTGAAGATAGGAATGCTGAGATGCCAAAACAAGAATCAGTTGGTTCAGCTGGCCACTCAAATATATGGCCTTACATTATAACAAAACGCTGTGAGGGTAAAATATTTGCTGAGTTAAGAGATAGACTATCAAGGGAAGATGTAACAAACTTAGCTTCCTTCTTGGGAGAGCAGTTGCGCCACATTCACCTTTTACCACGTCCACCCTTGAATATTTCACCTTTCTCTGATATTGAACAGGATTCAGGCTTGCCTAAGGTTAATGGTTATGTTGCAAGTTCTAATTATAAATCGAACATGGTAGCAGAGTGGGAAATCTTCATGGGAACTTTAACAAGAAAGAGGAAGGATGTTGTGAGCCGTTTGACTAAGTGGGGAGACCCGATCCCTAAGAAATTGATAGAGAAGGTCGATGAATATATCCCTCGTCAATTGGCAAATATGTTGACTATAATTGAGGGCAATGCTTGTAAACCATGCTCCTGGATACACTCTGACGTTATGGATGATAACATTTACATGGAACCATCTTGTGTTTCTACCTCAAGTGAAACTTCTGATGAGGGAGCGCAGGTAGACAATGGTTTTTCGTGTGGTCTCAGTGTAAACAGAGATGTGAAATCATGGCGCCCTAGCTACATCCTTGATTTCAGTGATCTTTCAATAGGTGATCCTATATTTGATTTGATACCAATTTATTTAGATGTATTTAGAGGGGATTCTTATCTCCTAAAGCTATTTTTAGAAAGCTACAAGCTTCCTTTTGCAATTAATAATTCAAAGAATGAGTCAACGGAGAGTGATGATAAATTTGGTCGGCTTTCATATCTTGCCATGTGCTACTGTATATTGCATGACGATGATGTCTTGGGAGCTATTTTTAGCATATGGGATGATCTTAGATCGGCAGATTCATGGGAAGAGGTTGAATTGAGAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTCCTTGA 2931 0.4111 MEPSTAQTGGELRDRRADALGDLRVLPDEILCAILEELTPRDVARLACVSSVMYILCNEETLWMILCLKGASGLLQYKSSWKKTALNRENLPGKYIECNRGFLHFDGFNSVYLYRRLYRCHTKLDTFYVDNGNVERRGDVSLKDFRDEYDGKKPVMLTGLADAWPARHKWTTDHLLLNYGDVSFKISQRSSRKILMKFKDYVSYMKLQHDEDPLYIFDEKFGEVAPSLLKDYCVPDLFQEDYFDILNEDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEDDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNYSNFEFVCLDMAPGYRHKGVCRAGLLALDDDGYEDVKKNMFCDEQNSSYSILSRREKRARNDEDGDDLNNERTKYGASRNYNVWKDGFSYDINFLSMFLDKDRDHYRSPWSSGNSIGQRELREWLSKLWVGKPEMRELIWKGACIALNADKWSKCLSEICSLHNMSSPLDDEKLPVGTGSNPVFLVGNTVVKIFVEGGLEAALHGLGTELQFYNILHEVNSPLRNHIPEVLASGILYLDDGTYTNLPWDGKGAPDIVIKSDLTRQKFGVDDFLFGVWDKMQFEDRNAEMPKQESVGSAGHSNIWPYIITKRCEGKIFAELRDRLSREDVTNLASFLGEQLRHIHLLPRPPLNISPFSDIEQDSGLPKVNGYVASSNYKSNMVAEWEIFMGTLTRKRKDVVSRLTKWGDPIPKKLIEKVDEYIPRQLANMLTIIEGNACKPCSWIHSDVMDDNIYMEPSCVSTSSETSDEGAQVDNGFSCGLSVNRDVKSWRPSYILDFSDLSIGDPIFDLIPIYLDVFRGDSYLLKLFLESYKLPFAINNSKNESTESDDKFGRLSYLAMCYCILHDDDVLGAIFSIWDDLRSADSWEEVELRVWGELNNYKGFP 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00034 976 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 20 589 - -
Pral5155g00034 976 SMART fbox_2 26 66 IPR001810 GO:0005515
Pral5155g00034 976 SUPERFAMILY Protein kinase-like (PK-like) 675 906 IPR011009 -
Pral5155g00034 976 Pfam F-box-like 25 68 IPR001810 GO:0005515
Pral5155g00034 976 SUPERFAMILY Clavaminate synthase-like 133 377 - -
Pral5155g00034 976 SUPERFAMILY F-box domain 20 82 IPR036047 GO:0005515
Pral5155g00034 976 SMART cupin_9 214 381 IPR003347 -
Pral5155g00034 976 Gene3D Cupin 117 371 - -
Pral5155g00034 976 Gene3D - 16 95 - -
Pral5155g00034 976 Pfam Cupin-like domain 151 369 IPR041667 -
Pral5155g00034 976 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Pral5155g00034 976 ProSiteProfiles JmjC domain profile. 223 386 IPR003347 -
Pral5155g00034 976 FunFam F-box protein At1g78280 114 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00034 Pral-Chr5155 182939 190974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00034 13 972 Glycosyltransferase AT1G78280 61.523 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral5155g00034 Cupin_8 2.3e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00034 - - gmx:100792541 1529.61