Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00019 ATGGCACTAGAGACTGTAGTTTTCTCGCAGGATCCCTTCTCACATAGTTGCTGCAAGGACTCGTACTCCTTTGCCGCGGCTTGGAACCCCGACGACCATGGCTTCCTTGCAGAAGAAGAGAAAGCCCCTGTTGGAGTGCTCATCAACAGCAACGTAGACGACAGACGTGTCCATGCAACTTGGGATTCTAACTCTTCTCCCGAGGCCTGCACCGCCGGCCCATCACTGATCTCCCCTGCTCCCTCGGGTCGTCGTAAACGACGTCGCACCAAGAGCGCCAAGAACAAGGAGGACCTAGAGAGCCAGAGGATGACTCACATTGCTGTGGAGCGCAATCGACGGAGACAGATGAATGACTACCTGGCGGTGCTTCGTTCCCTGATGCCTCCATCTTACGTTCAAAGGGGGGACCAAGCTTCTATAATAGGAGGCGCCATCAACTTTGTTAAGGAGCTAGAGCAGCTATTGCAGTCAATGGAGGGACGAAGGATGAGGACGAAGCAACAAGAGCAAGAGTGCGGGACGTGCAGCTCGCCCTTCGCCGAGTTCTTCACGTTCCCCCAGTACTCCACCCATGCAAATCAGAGCAACACCAGTTCCCAGCAATGGGCCGTCGCAGACATTGAAGTCACCATGGTCGACACCCACGCCAACCTCAAGATACTCTCCAAGAAACGCTCCGGCCAGCTCACCAAGATCGTCGTCGGCCTTCAAGCTCTCAGGCTCACCGTTCTCCACCTTAACGTGACGACTCACGACGACATGGTCCTTCACTCTGCCAGCGTCAAGCTCGAAGATGGGTGTGAGCTGAACACGGTGGATGAAATCGCTGCTGCTGTGCACGAAATAATGCGCAGAATCCAAGAGGAATCGCCTTTCTGTTAA 885 0.5469 MALETVVFSQDPFSHSCCKDSYSFAAAWNPDDHGFLAEEEKAPVGVLINSNVDDRRVHATWDSNSSPEACTAGPSLISPAPSGRRKRRRTKSAKNKEDLESQRMTHIAVERNRRRQMNDYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGRRMRTKQQEQECGTCSSPFAEFFTFPQYSTHANQSNTSSQQWAVADIEVTMVDTHANLKILSKKRSGQLTKIVVGLQALRLTVLHLNVTTHDDMVLHSASVKLEDGCELNTVDEIAAAVHEIMRRIQEESPFC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00019 294 Gene3D - 85 177 IPR036638 GO:0046983
Pral5155g00019 294 SMART finulus 107 158 IPR011598 GO:0046983
Pral5155g00019 294 Pfam Helix-loop-helix DNA-binding domain 102 153 IPR011598 GO:0046983
Pral5155g00019 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 174 IPR036638 GO:0046983
Pral5155g00019 294 Coils Coil 149 169 - -
Pral5155g00019 294 PANTHER MAX DIMERIZATION, MAD 73 290 - -
Pral5155g00019 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 152 IPR011598 GO:0046983
Pral5155g00019 294 MobiDBLite consensus disorder prediction 61 101 - -
Pral5155g00019 294 CDD bHLH_AtFAMA_like 104 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00019 Pral-Chr5155 119800 121506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00019 1 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.814 4.47e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5155g00019 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00019 - - gmx:100803240 345.895