Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00018 ATGAAGAGTAACACTAACAACGAGGAGCGTAGAGGCGCAGGCATCCCCAGACTGTTCAAACTCGACGATGAACTTACCAGTGTTACTATGCCTCATGTTTCGTCACAGGCAACGCCGCCGCAGGCACCTGCTCAGATCATGGAGCCACCCATGATGACCTACGACAACAAGACCATGGCCATCATCATGGGCGCCGTGGTCGTCGTCTTCTTGGTATCGGGCTTCGTTTCCCTGTACAATCGTCAATGTGGGGACAGACGCCGTTTCCGAGGCCACATCGACCTCACATTTCCAATGGGGCCCCTGCGATCCAGTTCCCGCGCCCAGGGTCGCGGTGTGAGCCCGGAGATCATCCAGAGCTTCCCCACTTTCCTGTACTCGACGGTGAAGGGGAGAGGGGCGCTGGCATGCGCGGTGTGCTTGAACGAGTACGAAGACGATGACACGCTGAGGTTAATCCCGAAATGCAGGCACGTGTTCCACCCCGAATGCATCGACGGCTGGCTGGCGTCTCACTACACGTGCCCACTGTGCCGGGCCAACCTGCTGGTTCCGGTAGTACTGCAGAGCGAGAGCGAGGTGACGCCTTTGGTAGCCGTCGGAATTCCAGATTCAGAAGAACAAAACGAGCACGATAATAGTGAGAACGAGAATAATGGAGGAGGGAGGGGGAATACAAGAGGGTATCGGAGTAGGACGGTGAAGGAGAGGGTGGGTCCAAGTCGGTCAAGGTCAACGGGACTGCTGATGGGGATACTGTTTGGGAGGTCTCGGTCAACGGGAGAAGCTGGAGGAGGGAGGGAGTAG 807 0.5713 MKSNTNNEERRGAGIPRLFKLDDELTSVTMPHVSSQATPPQAPAQIMEPPMMTYDNKTMAIIMGAVVVVFLVSGFVSLYNRQCGDRRRFRGHIDLTFPMGPLRSSSRAQGRGVSPEIIQSFPTFLYSTVKGRGALACAVCLNEYEDDDTLRLIPKCRHVFHPECIDGWLASHYTCPLCRANLLVPVVLQSESEVTPLVAVGIPDSEEQNEHDNSENENNGGGRGNTRGYRSRTVKERVGPSRSRSTGLLMGILFGRSRSTGEAGGGRE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00018 268 FunFam E3 ubiquitin-protein ligase ATL6 102 185 - -
Pral5155g00018 268 SUPERFAMILY RING/U-box 115 189 - -
Pral5155g00018 268 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Pral5155g00018 268 Pfam Ring finger domain 136 179 IPR001841 -
Pral5155g00018 268 PANTHER RING FINGER DOMAIN-CONTAINING 34 191 - -
Pral5155g00018 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 184 IPR013083 -
Pral5155g00018 268 SMART ring_2 137 178 IPR001841 -
Pral5155g00018 268 CDD RING-H2_EL5-like 137 179 - -
Pral5155g00018 268 MobiDBLite consensus disorder prediction 202 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00018 Pral-Chr5155 105713 106519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00018 59 182 Rapid Response to Elicitors AT3G05200 49.618 2.57e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00018 K10664 - mnt:21408745 177.178