Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5155g00018 | ATGAAGAGTAACACTAACAACGAGGAGCGTAGAGGCGCAGGCATCCCCAGACTGTTCAAACTCGACGATGAACTTACCAGTGTTACTATGCCTCATGTTTCGTCACAGGCAACGCCGCCGCAGGCACCTGCTCAGATCATGGAGCCACCCATGATGACCTACGACAACAAGACCATGGCCATCATCATGGGCGCCGTGGTCGTCGTCTTCTTGGTATCGGGCTTCGTTTCCCTGTACAATCGTCAATGTGGGGACAGACGCCGTTTCCGAGGCCACATCGACCTCACATTTCCAATGGGGCCCCTGCGATCCAGTTCCCGCGCCCAGGGTCGCGGTGTGAGCCCGGAGATCATCCAGAGCTTCCCCACTTTCCTGTACTCGACGGTGAAGGGGAGAGGGGCGCTGGCATGCGCGGTGTGCTTGAACGAGTACGAAGACGATGACACGCTGAGGTTAATCCCGAAATGCAGGCACGTGTTCCACCCCGAATGCATCGACGGCTGGCTGGCGTCTCACTACACGTGCCCACTGTGCCGGGCCAACCTGCTGGTTCCGGTAGTACTGCAGAGCGAGAGCGAGGTGACGCCTTTGGTAGCCGTCGGAATTCCAGATTCAGAAGAACAAAACGAGCACGATAATAGTGAGAACGAGAATAATGGAGGAGGGAGGGGGAATACAAGAGGGTATCGGAGTAGGACGGTGAAGGAGAGGGTGGGTCCAAGTCGGTCAAGGTCAACGGGACTGCTGATGGGGATACTGTTTGGGAGGTCTCGGTCAACGGGAGAAGCTGGAGGAGGGAGGGAGTAG | 807 | 0.5713 | MKSNTNNEERRGAGIPRLFKLDDELTSVTMPHVSSQATPPQAPAQIMEPPMMTYDNKTMAIIMGAVVVVFLVSGFVSLYNRQCGDRRRFRGHIDLTFPMGPLRSSSRAQGRGVSPEIIQSFPTFLYSTVKGRGALACAVCLNEYEDDDTLRLIPKCRHVFHPECIDGWLASHYTCPLCRANLLVPVVLQSESEVTPLVAVGIPDSEEQNEHDNSENENNGGGRGNTRGYRSRTVKERVGPSRSRSTGLLMGILFGRSRSTGEAGGGRE | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5155g00018 | 268 | FunFam | E3 ubiquitin-protein ligase ATL6 | 102 | 185 | - | - | |
Pral5155g00018 | 268 | SUPERFAMILY | RING/U-box | 115 | 189 | - | - | |
Pral5155g00018 | 268 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 179 | IPR001841 | - | |
Pral5155g00018 | 268 | Pfam | Ring finger domain | 136 | 179 | IPR001841 | - | |
Pral5155g00018 | 268 | PANTHER | RING FINGER DOMAIN-CONTAINING | 34 | 191 | - | - | |
Pral5155g00018 | 268 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 184 | IPR013083 | - | |
Pral5155g00018 | 268 | SMART | ring_2 | 137 | 178 | IPR001841 | - | |
Pral5155g00018 | 268 | CDD | RING-H2_EL5-like | 137 | 179 | - | - | |
Pral5155g00018 | 268 | MobiDBLite | consensus disorder prediction | 202 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5155g00018 | Pral-Chr5155 | 105713 | 106519 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5155g00018 | 59 | 182 | Rapid Response to Elicitors | AT3G05200 | 49.618 | 2.57e-37 | 134 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5155g00018 | K10664 | - | mnt:21408745 | 177.178 |