Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00017 ATGACAGTCCATTCCCACACTCCCCCTCCTCCCATCCCCCCGCCCTCCAGTCTCCATCATCGCCATGGCCTCCGCTGCCTTGTCCTGTTTCTACTTGCCTTCTCGGCTACCGCGCAATTCCCCGCGGCTCCCCCGCCTCCGCCCGCCGACCCTTTTGCCAGGCTCAAGTTCGACAAGAACATGGCCATCATCATGGTCATCCTGGTCCTCGTCTTCTTCATTTTGGGCTTCCTTTCCATCTACACCCGCCAATGCGCAGAGCGCCGAATGAGAGGAAGACTCGACCTCACTCTCCCGATCGGCATCAGCAGCCGTCGACCGCGTGGTCTTGAACCCGAGATCATCGATAGTTTTCCCACTTTCGTTTACTCCTCCGTCAAGGGGCTTAAGATGGGAAGGACCTCGCTGGAATGCGCCGTCTGTTTGAACGAGTTCGAAGATGATGAAACTCTGCGTTTGATCCCCAGATGCAGCCACGTGTTTCATCCTGATTGTATCGATCTTTGGCTTTCTTCTCACTCCACCTGCCCCCTCTGCCGCGCCAACCTGGTTCCAAAACCCGGTGATTCCTCCTTCGTCGCCATTCAGATCCCCAATCCGGACGTCGATTCGCCTCACCCTGACTCAGGTTTGAATTCCCGTGAGATGCCCCAGGAGAACATCAACACGGCGGCACCGGAGTCTCCGATTCTGAGCCGAAATCACACAGTGAACCGGAGCCGGACTCCTCGGTCAAAGTCAACGGGGTTCTGGTTGGCTGGCTTATTCCCCCGTTCTCACTCCACGGGTCATTCCTTGCAGCTTCGTCCCGGAGAGAATTGGGAAAGGTTTACTCTCAGATTACCGGAGGATGCCCGAAGGCAATTACTAAAGCGAACAAATAGTTGCGTAGCGTTCACAAGGGAGAGCAGTCAGAGGAGGGGTTATAGGACAAGAAGTGTAGGGAGTGGAAGGGGAAGGAACTATTTCCAGCACGAGCGATTCGGAGGCGAGGGGCGGCCAGAGCAATGGGGGTTCACGGTGAGGCCGCCGTTTTTGAGCAGGAGTGGTTCGACCGTGACGAACAAGGCACCGGAGGGTCCGTCGGGGGTGGGGATAGACGACATCGTGGAACGGTCTTCTGATCCACTGTTTTCCGGGAACAAAGATTAG 1152 0.5651 MTVHSHTPPPPIPPPSSLHHRHGLRCLVLFLLAFSATAQFPAAPPPPPADPFARLKFDKNMAIIMVILVLVFFILGFLSIYTRQCAERRMRGRLDLTLPIGISSRRPRGLEPEIIDSFPTFVYSSVKGLKMGRTSLECAVCLNEFEDDETLRLIPRCSHVFHPDCIDLWLSSHSTCPLCRANLVPKPGDSSFVAIQIPNPDVDSPHPDSGLNSREMPQENINTAAPESPILSRNHTVNRSRTPRSKSTGFWLAGLFPRSHSTGHSLQLRPGENWERFTLRLPEDARRQLLKRTNSCVAFTRESSQRRGYRTRSVGSGRGRNYFQHERFGGEGRPEQWGFTVRPPFLSRSGSTVTNKAPEGPSGVGIDDIVERSSDPLFSGNKD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00017 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 185 IPR013083 -
Pral5155g00017 383 PANTHER RING FINGER DOMAIN-CONTAINING 45 183 - -
Pral5155g00017 383 MobiDBLite consensus disorder prediction 341 383 - -
Pral5155g00017 383 SMART ring_2 138 179 IPR001841 -
Pral5155g00017 383 SUPERFAMILY RING/U-box 132 188 - -
Pral5155g00017 383 CDD RING-H2_EL5-like 137 180 - -
Pral5155g00017 383 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Pral5155g00017 383 FunFam E3 ubiquitin-protein ligase ATL6 100 186 - -
Pral5155g00017 383 Pfam Ring finger domain 137 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00017 Pral-Chr5155 101584 103154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00017 23 369 Rapid Response to Elicitors AT3G05200 37.166 5.22e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00017 K10664 - qsa:O6P43_019600 373.244