Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00007 ATGGAATTTGAGGAGCAAGATCAGGAGCACGAAGAGGCAGAGGAAGAAATGGGGATTCCCATGCCCCCGACTAGCTACGACTCGGCTCCCTCCAAAACTGGTGCTGCCTTCGGAGCCGAGGGAGGTGCATCCGCCCTGACTGGGGGCAGGAAAGGCGGTCAGACGGGAACAGTCAGGTACAGGGAGTGTCAAAAGAATCACGCCGTCAGCATCGGCGGCCACGCCGTTGACGGTTGCGGTGAGTTTTTAGCGGCGGGAGAGGAAGGCACGCTTGACGCTCTCAAATGCGCCGCCTGCAACTGTCACCGCAACTTCCACCGCAAGGAGATCGAGGGAGAAACTAGCTCCTTTCACCTGCCGCCGCAGCCGCACCACCCCCAGTACCACCATCAATTTCCCCACTACTACCGCGGTCCGCCACCGCCAGGCACAGGATACCTCCACCACCACCTGACAAATCCGGCGATGGCACATCACCGGCCTCTGGCTCTGCCAGCCGCGGCATCCGGAGGGGGACTGAGTAGAGAAGATGAAGACATGTCCAATCCGAGTAGCAGCGGAGGCGGGGGTTTCGGCGGTGGGGGGAGCGGTAGCGAAAGGAAGAAACGGTTTCGAACGAAATTCACGCAGGAGCAGAAGGAGAAGATGCTGGCATTTTCGGAAAAGGTGGGGTGGAGAATCCAGAAGCATGACGAACCAGCGGTGGAGCAATTCTGTGCGGAGACCGGTGTCAAGAGACAGGTACTCAAGGTTTGGATGCATAATAACAAAAACACTCTCGGTAAGAAACCCTAA 795 0.5811 MEFEEQDQEHEEAEEEMGIPMPPTSYDSAPSKTGAAFGAEGGASALTGGRKGGQTGTVRYRECQKNHAVSIGGHAVDGCGEFLAAGEEGTLDALKCAACNCHRNFHRKEIEGETSSFHLPPQPHHPQYHHQFPHYYRGPPPPGTGYLHHHLTNPAMAHHRPLALPAAASGGGLSREDEDMSNPSSSGGGGFGGGGSGSERKKRFRTKFTQEQKEKMLAFSEKVGWRIQKHDEPAVEQFCAETGVKRQVLKVWMHNNKNTLGKKP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00007 264 NCBIfam homeobox domain, ZF-HD class 201 258 IPR006455 -
Pral5155g00007 264 SUPERFAMILY Homeodomain-like 187 262 IPR009057 -
Pral5155g00007 264 Gene3D - 190 261 - -
Pral5155g00007 264 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 260 - -
Pral5155g00007 264 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 109 IPR006456 -
Pral5155g00007 264 Pfam ZF-HD protein dimerisation region 58 110 IPR006456 -
Pral5155g00007 264 FunFam Zinc-finger homeodomain protein 2 194 262 - -
Pral5155g00007 264 MobiDBLite consensus disorder prediction 1 55 - -
Pral5155g00007 264 MobiDBLite consensus disorder prediction 165 202 - -
Pral5155g00007 264 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00007 Pral-Chr5155 49209 51642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00007 1 260 ZF-HD Transcription Factor Family AT4G24660 52.290 2.11e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral5155g00007 ZF-HD_dimer 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00007 - - pcin:129294191 418.698