Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00003 ATGGCACCCAGTTTCGATTGTGTCTCGGCACTTCTCTGCGCAGAAGACGACAGCATTTTCGACGATGGCGATTATGGAGCTACGATGGAGCCGTTGGACGTTACACGCGGACCCCGTAACCATAACCTGTGCTTTCATGATCGACACGATGGGTTGCCATTGCAGAGTGACGAGTGTTTAGCGCAAATGGTGCAAAAGGAATGCGACCACTTGCCTGCAGGAGATTACCTGAATAGGCTACGAACTGCGGATTTGGACTTTGGGGCCAGAAAGGAGGCCGTTGATTGGATTGAAAAGGTTCGAGAGCACTTCGGTTTCAGCCCCCTCTGTACATATCTATCCATAAACTATCTGGACCGTTTCCTTTCATCATACGAATTACCAAAGGGAAAAGGCTGGACAATGCAATTGTTGGCCGTGGCATGCCTGTCTCTCGCTGCCAAAATGGAAGAGGCTGAAGTTCCCCTGTCTGTTGATTTGCAGGTGGGAGGATCAAAGTTCGTATTTGAAGCAAGAACAATACAAAGAATGGAACTTTTGGTACTGAGCACACTGAGGTGGAGAATGCAAGCCATCACTCCGTTTTCCTTCATAGACTATTTTCTATTCAAGCTGAATGATGATCAGAAACCAGAAGGAAGTTCCATATCGCGATCCATCCAAATCATATCGAGCACAGCGAGAGGGGTTGACTTATTGGAATTCAGGCCCTCGGAAGTTGCAGCGGCAGTGGCAATATGTGTTGTAAGGGAAACCCAAACGGTGAATACGGAGAAAGCAATTTCGGTGCTGAGTCAACATGTTGAAAAGGAGAGAGTGGTGGAGTGCTTGAAGATAATAAAGGAGATGGCATCAAACGGAAGAGAAGACTGCGTGGCGCAGAGCCCAATTGGGGTGTGGGAGGCGGCCGCATTATGCTGGAGCCATAAAAGCGAAGGATCAAGTTCATGTGGGAGTTCGTCTTCGTCACGTGATGGCCCCGATCCTAAAAGGATCAAGTTAAACAATACAAGTAACAGTGGAGTAGAGCTGTTGTAG 1038 0.4807 MAPSFDCVSALLCAEDDSIFDDGDYGATMEPLDVTRGPRNHNLCFHDRHDGLPLQSDECLAQMVQKECDHLPAGDYLNRLRTADLDFGARKEAVDWIEKVREHFGFSPLCTYLSINYLDRFLSSYELPKGKGWTMQLLAVACLSLAAKMEEAEVPLSVDLQVGGSKFVFEARTIQRMELLVLSTLRWRMQAITPFSFIDYFLFKLNDDQKPEGSSISRSIQIISSTARGVDLLEFRPSEVAAAVAICVVRETQTVNTEKAISVLSQHVEKERVVECLKIIKEMASNGREDCVAQSPIGVWEAAALCWSHKSEGSSSCGSSSSSRDGPDPKRIKLNNTSNSGVELL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00003 345 Gene3D - 73 190 - -
Pral5155g00003 345 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Pral5155g00003 345 PANTHER CYCLINS 58 284 IPR039361 -
Pral5155g00003 345 Pfam Cyclin, C-terminal domain 192 286 IPR004367 -
Pral5155g00003 345 SMART cyclin_7 95 183 IPR013763 -
Pral5155g00003 345 MobiDBLite consensus disorder prediction 312 345 - -
Pral5155g00003 345 FunFam D6-type cyclin 187 278 - -
Pral5155g00003 345 FunFam D2/4-type cyclin 73 186 - -
Pral5155g00003 345 SMART Cyclin_C_2 192 321 IPR004367 -
Pral5155g00003 345 Pfam Cyclin, N-terminal domain 60 189 IPR006671 -
Pral5155g00003 345 Gene3D - 60 278 - -
Pral5155g00003 345 SUPERFAMILY Cyclin-like 53 189 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00003 Pral-Chr5155 15352 18059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00003 55 260 Core Cell Cycle Gene Families AT5G65420 58.173 7.16e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00003 K18810 - gmx:100803873 424.861