Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5155g00001 ATGACGTGGGATGAGTGGGACAACAATATCCCAGAAGGTGACCAACCTGACCAAGATTCCTATCTCAACTTCGATTTCTCTTCCCTGCTCTGCCCAAGCCCAGTGGTATTTGTGGATGCGTGTTGTCCTGAAATTGTGAGTTGTGTTTCACAGGATTATTATAAGATTCTGGAAGTAGATTATGATGCTACAGACGACGCTATTCGCTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGAAGAAAGGCCAAGATGCCGCAACTTCCCGATTCCAAGAGATAAACGAGGCTTATCAGGTCTTAAGCGATCCCGCCAAAAGGAGAGAGTATGACAAAAATGGGATGCTTTATGTCTATGATTGCAATCTCATGGATTATCTTAATCGTTACAAGAGCCTTATATTGACGTGTAATGGCCTTGGGATGAAGCAATTCATATGGTAA 453 0.4327 MTWDEWDNNIPEGDQPDQDSYLNFDFSSLLCPSPVVFVDACCPEIVSCVSQDYYKILEVDYDATDDAIRSNYIRLALKWHPDKKKGQDAATSRFQEINEAYQVLSDPAKRREYDKNGMLYVYDCNLMDYLNRYKSLILTCNGLGMKQFIW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5155g00001 150 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Pral5155g00001 150 ProSiteProfiles dnaJ domain profile. 52 117 IPR001623 -
Pral5155g00001 150 CDD DnaJ 52 106 IPR001623 -
Pral5155g00001 150 SMART dnaj_3 51 109 IPR001623 -
Pral5155g00001 150 SUPERFAMILY Chaperone J-domain 50 137 IPR036869 -
Pral5155g00001 150 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 150 - -
Pral5155g00001 150 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pral5155g00001 150 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pral5155g00001 150 PRINTS DnaJ domain signature 109 128 IPR001623 -
Pral5155g00001 150 PRINTS DnaJ domain signature 89 109 IPR001623 -
Pral5155g00001 150 FunFam Chaperone protein DNAj, putative 44 131 - -
Pral5155g00001 150 Pfam DnaJ domain 52 114 IPR001623 -
Pral5155g00001 150 Gene3D DnaJ domain 43 128 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5155g00001 Pral-Chr5155 566 3036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5155g00001 53 116 C2H2 Transcription Factor Family AT1G74250 43.478 3.71e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5155g00001 - - jre:108985063 217.238