Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5151g00002 ATGGGGAGAAGCCCTTGCTGCACCAAGGAGGGCTTGAACAGAGGTGCCTGGACTGCTCACGAAGACAAGATCCTCAGAGACTACATTTCTGTGCACGGTGAAGGCCGGTGGCGCAACCTCCCCAAACGAGCAGGTTTGAAAAGATGTGGCAAAAGTTGCAGACTCCGATGGCTCAACTATCTCAGACCAGATATTAAGAGGGGTAACATCACCCCTGACGAAGAAGAGCTCATCGTCCGCCTTCACAAGCTCTTGGGAAACAGATGGTCGCTGATAGCGGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAATTACTGGAACACTAACTTAGGAAAGAAAGTGAAACATCATTGTCACCAAAACAATGCTGCCTCCCCTGGTAGACTCTCTGCTCACCATCAGGCCGACAGAGCTTCCAAGAATCATAATCCTGCGAATCTCAAGCCCAAATCAAACTCCCTGCCTTCTCCGGATGTTGTCCGTACAAAAGCCGCCAAGTGTTCGAAGGTGATCATCACCCCCCGTCCCCCTTCTTCCAGGCAATTCTTGCAGATGACCAAGTCTGAAGCAGAGCCGCTTCCGCAGGGTGATGTTGCGGCGGCGGCTGCCTGCAACCGGACGACGGAGTTACTCGGCGGAGATGATAATCACGCGTTGCTGTCGTCCGGCGCGGTGATGGATCATCATTATCAGGAGCCGCCGTCTGCGGATATGCTGGTGAATTTCAACGCGGGAGAGATCTGCTTGTCGGACTTCCTAAACTCGGATTTCTCAGAAATGTGCGACTTCAGTAACAACAGCGTCGACGGCTTGTCCCCATCATCCGACGAACCCTTCGTGTTCTCCGACGAAATTCTGAGAGATTGGACGCAGAGCAACGTGGAAGACACAAGTGTGGCCAATAATCTTCACTCTTTCACATCCTTCCTTGAATCCAGTGAGGGATGGCTGGCAGGGTAA 966 0.5238 MGRSPCCTKEGLNRGAWTAHEDKILRDYISVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKHHCHQNNAASPGRLSAHHQADRASKNHNPANLKPKSNSLPSPDVVRTKAAKCSKVIITPRPPSSRQFLQMTKSEAEPLPQGDVAAAAACNRTTELLGGDDNHALLSSGAVMDHHYQEPPSADMLVNFNAGEICLSDFLNSDFSEMCDFSNNSVDGLSPSSDEPFVFSDEILRDWTQSNVEDTSVANNLHSFTSFLESSEGWLAG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5151g00002 321 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 163 - -
Pral5151g00002 321 SMART sant 66 114 IPR001005 -
Pral5151g00002 321 SMART sant 13 63 IPR001005 -
Pral5151g00002 321 CDD SANT 16 61 IPR001005 -
Pral5151g00002 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral5151g00002 321 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pral5151g00002 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral5151g00002 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral5151g00002 321 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral5151g00002 321 MobiDBLite consensus disorder prediction 122 161 - -
Pral5151g00002 321 Gene3D - 71 155 - -
Pral5151g00002 321 FunFam MYB-related transcription factor 13 66 - -
Pral5151g00002 321 CDD SANT 71 112 IPR001005 -
Pral5151g00002 321 Gene3D - 14 66 - -
Pral5151g00002 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral5151g00002 321 MobiDBLite consensus disorder prediction 142 160 - -
Pral5151g00002 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5151g00002 Pral-Chr5151 5491 6908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5151g00002 1 223 MYB Transcription Factor Family AT2G47460 45.992 3.67e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5151g00002 Myb_DNA-binding 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5151g00002 K09422 - tcc:18588305 348.977