Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral514g00012 ATGGGAATCTTTCACAAGTGCTTTGGAGGCCCTGCTTCCACTTCTCGGAAACATCCTTCCACAACAATAGAATATCTGTGCCATCGCTTTTCTCTTTCCCAACTTCGAAAATCCACCGACAACTTTGACGACAGCCGGATTATAGGTGAAGGGCCCTTTGGTGTGGGGTATAGGGCTCGCATCTCCGTCAATGGCCAAATGAAAGATCTTATAGTGAAAAGGCTCCGGCGAGAAGCGGCGAATTCCTCATACGGGCTCTTACTGTATAAGAACGATATCATATTTAGATGTCAGCTTCACCATCCGAATCTCGTGTCTCTGGTTGGATTTTGCGATGATCAAAATGAAATGATCGTGGTCTATGACTACGCCCCAAACGGATCACTCTATCAGCAACTTTACGAAACAGAGGCTAAGCCAGCAATACGACCATGGAAGAAAAGGCTAGAAATCAGTATAGGAGTGGCGCGTGGATTACACTACCTTCACTCAGGAACCAAACGCACCATCATTCACCGCGATATTACACCGTTTGCCATTCTTCTGGGCGAGCATTGGATTCCCAAACTCAATTTTTTCGGGTTCTCTATAAAAGGACCAAAGTTTTCAGAAAAGGATGTGAAACCCATACAGTTGGAATCCATTGAAGGCCCTGTGGGATACATAGCTCCTGAGTGCATTAGTGGCACTAATGTCACGTATAAAAGTGACGTCTATTCTTTTGGAGCAGTTTTGTTAGAACTCATTTGCGGAAAGACTTTATTCCAGATTGTTCAGCATAAGGGGCGTCATGTTGACAAGACTGCAAGTGTCATTCCATTTACAACGAGTGTGGTTAAGGAAGTCCGTAATTGGGAAGAAAGAGGAAATGCTGGAGGAATTATTGATCAGAGTTTGATGGGAGAAATAGCAGCAGAGTGTTGGAAATTGTATATGGACATTACAGAGAGTTGCTTGAGTGAAGATCCCGATGAGAGGCCTGATATGGGAGACGTTGAAGTCCAACTTGAACGTCTGTTGCAACTACAAGAGGAAGCAGTTTCCATGATTCTTGAAGATCCATCAGCCAAAAGTATCTGA 1080 0.4417 MGIFHKCFGGPASTSRKHPSTTIEYLCHRFSLSQLRKSTDNFDDSRIIGEGPFGVGYRARISVNGQMKDLIVKRLRREAANSSYGLLLYKNDIIFRCQLHHPNLVSLVGFCDDQNEMIVVYDYAPNGSLYQQLYETEAKPAIRPWKKRLEISIGVARGLHYLHSGTKRTIIHRDITPFAILLGEHWIPKLNFFGFSIKGPKFSEKDVKPIQLESIEGPVGYIAPECISGTNVTYKSDVYSFGAVLLELICGKTLFQIVQHKGRHVDKTASVIPFTTSVVKEVRNWEERGNAGGIIDQSLMGEIAAECWKLYMDITESCLSEDPDERPDMGDVEVQLERLLQLQEEAVSMILEDPSAKSI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral514g00012 359 SUPERFAMILY Protein kinase-like (PK-like) 25 334 IPR011009 -
Pral514g00012 359 Gene3D Transferase(Phosphotransferase) domain 1 124 355 - -
Pral514g00012 359 Pfam Protein tyrosine and serine/threonine kinase 46 334 IPR001245 GO:0004672|GO:0006468
Pral514g00012 359 Gene3D Phosphorylase Kinase; domain 1 10 123 - -
Pral514g00012 359 ProSiteProfiles Protein kinase domain profile. 42 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral514g00012 359 PANTHER OS07G0166700 PROTEIN 27 343 IPR045272 GO:0004714|GO:0006468
Pral514g00012 359 PIRSF ILK 15 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral514g00012 Pral-Chr514 124164 126618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral514g00012 28 359 Receptor kinase-like Gene Family AT2G39360 37.126 5.84e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral514g00012 PK_Tyr_Ser-Thr 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral514g00012 - - pcin:129318153 429.869