Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00038 ATGCATCCACCGTCTCTGGGTACACCTCTCCCCCATTACAGACTCGACGATTACCAGCCAGGGGCCCCACCTCCCTGGGACAACTCGCCGCCTCCGCCGCCTCCAACTGATGACTTCTCACTGCCTCCGCAGTCAGAGTTGGCCCCTGCCTTGGCTTCAACCGCGGCGCAGTCCGTATCGCCTGCAGAAGCACCTCCGCCATCGCACCGGTCTCCGTCAATCTTGCTAATCGCAGGACTGGCTGTGCTTGGTTTGTTGCTGATACTGGGGTTATTATGTGCTGTTTTCTTCATATGGAGAGCGAGAAGGAACAGAAGGATGAGAGGAAAAGACAACCCCTCTGCACAACCACACCAACCAGGAGATCCATCCCACCACATCGCCATGACCCCGTCAGTCAACAACCCACAGTCGCTGAACCGTCCCCAGCCATCAACCCTCACGGTGCCTTCTCGAGCACAACTAGGTCGACCACTGTCTAATCCCAGAGTCTTGGAAAGGTCACGAGCACCAAGAATATTTACATATGAGGAATTAGAATCGGCAACAAAGGGGTTCGCGGAGTCAAATAAACTGGGCCGAGGTGGTTTTGGCACAGTCTATAAAGGAGTGCTCCCTCCTGATAACGAAATTGTGGCGGTTAAGAAGCTAAACTCTGGAGCACAAGGAAAGGAAGAGCTGGAGACTGAAATCAAGGTCATAAACCAAGCCCGTCACAAGCATATTGTTTCCCTCGTTGGATACTACATTGATGAAGATGAAGCCCTTAGGTCCGACATGCTGCTTGTTTATGAGTTCATCCCAAATGATTCTTTACAGTACCACCTGCATGGGACAGGCACAGAAACTATAGATTGGGAAACAAGGATGAAGATTGCTATTGGCTCCGCAAAAGGATTGAGATATCTTCATGAAGACTGTGAACCCAAAATCATACACTGTGACATCAAACCACACAACATTCTTCTTCAGGGTGATTTTCAGCCAAAGATAGCAGACTTTGGACTTGCACAACTTTTATCTGACACTGTTACCCACGTCTCCCAGTCACGATTCATGGGAACTTTTGGATATTTAGCTCCGGAGTATATTCTTGGCGGGAAGATCAGTGAGAAGTCAGATGTCTTCGCCTTTGGTGTTGTTCTTTTGGAGTTGATCACAGGACGAAAACCTAGCGAGTGCACAGGAGGCATGGTTATCTGGGCAACCCCTCTACTCATCGCAGCCGTGAGATCCGAAGATACAGACTTTGAGGCTCTTGCTGATCCAAGGTTGCGCAATAAGTACGAGCCCGAAGGCATGTTTCGAATGGTTTCTTGTGCTGCTCATTGCGTCTGCCGTCCAGCCGCGCGTCGTCCTCGAATGAGCCAGGTGGTTCAAGCTTTAGAAGGAACGATTCGCCTGAATAATGATGATCTGACTGAGGACGCCACGTGA 1437 0.5024 MHPPSLGTPLPHYRLDDYQPGAPPPWDNSPPPPPPTDDFSLPPQSELAPALASTAAQSVSPAEAPPPSHRSPSILLIAGLAVLGLLLILGLLCAVFFIWRARRNRRMRGKDNPSAQPHQPGDPSHHIAMTPSVNNPQSLNRPQPSTLTVPSRAQLGRPLSNPRVLERSRAPRIFTYEELESATKGFAESNKLGRGGFGTVYKGVLPPDNEIVAVKKLNSGAQGKEELETEIKVINQARHKHIVSLVGYYIDEDEALRSDMLLVYEFIPNDSLQYHLHGTGTETIDWETRMKIAIGSAKGLRYLHEDCEPKIIHCDIKPHNILLQGDFQPKIADFGLAQLLSDTVTHVSQSRFMGTFGYLAPEYILGGKISEKSDVFAFGVVLLELITGRKPSECTGGMVIWATPLLIAAVRSEDTDFEALADPRLRNKYEPEGMFRMVSCAAHCVCRPAARRPRMSQVVQALEGTIRLNNDDLTEDAT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00038 478 Gene3D Transferase(Phosphotransferase) domain 1 267 476 - -
Pral5144g00038 478 Pfam Protein kinase domain 187 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00038 478 SUPERFAMILY Protein kinase-like (PK-like) 161 463 IPR011009 -
Pral5144g00038 478 MobiDBLite consensus disorder prediction 23 40 - -
Pral5144g00038 478 ProSitePatterns Protein kinases ATP-binding region signature. 192 216 IPR017441 GO:0005524
Pral5144g00038 478 ProSiteProfiles Protein kinase domain profile. 186 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00038 478 CDD STKc_IRAK 192 464 - -
Pral5144g00038 478 MobiDBLite consensus disorder prediction 108 162 - -
Pral5144g00038 478 MobiDBLite consensus disorder prediction 1 69 - -
Pral5144g00038 478 FunFam proline-rich receptor-like protein kinase PERK8 267 477 - -
Pral5144g00038 478 SMART serkin_6 186 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00038 478 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 91 473 IPR047117 -
Pral5144g00038 478 Gene3D Phosphorylase Kinase; domain 1 157 266 - -
Pral5144g00038 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Pral5144g00038 478 MobiDBLite consensus disorder prediction 128 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00038 Pral-Chr5144 436430 445723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00038 40 463 Trihelix Transcription Factor Family AT1G70460 43.207 4.42e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00038 Pkinase 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00038 - - pcin:129289322 391.734