Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00036 ATGTCACCTTCTCTTGCAGCTGAAGAGGTTGCAGTTTCACTTCTACCATCTTCCATTACGTTTGATCATTCACCGGGCACATTTACATACGAAGAATTAGAATTGGCAACAGGTGGATTCTCAGAGTCAAATTTTCTGGGCCAAGGTGGTTTTGGCACTGTCCATAAAGGAGTACTTCCTAAAAATAATCAAAGTGTTGCCATTAAGCAACAAAGATCTGGAAGCAAACAGGGAATGCAAGAGTTCCAGACTGAAGTGCAGGTCATTAGTCGAGTCCATCACAGACATCTCGTTTCCCTTGTTGGATACTGCACTGCCGAATCTCAAAGGACGTTGATGCTTGTTTATGAGTTTGTCCCTAATAAAACCCTGGACTTCCACCTCCACGGAAAAGATACAGACACTCTGGACTGGTCAACAAGGATGAAGATTGCTAATGGCTCTGCAAAAGGATTGGCATATCTGCACGAAGACTGTGAACCCAAAATCATACATCGTGACATCAAGGCAGCTAACATTCTTATTGATAACAATTTTGAGCCAAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACAATGATACCCATGTCACTACAGCCCGAATAAAGGGAACCTTTGGATACTTGGCTCCAGAATATGCATCTAGCGGTAGACTCACAGAGAAGGCAGATGTCTTCTCCTTTGGTGTTGTGCTCTTGGAGTTAATTACTGGACGAAAACCTGTTCTTCAAACTGGGTCTTTCACAGAAGACAGTCTGGTTGAGTGGGCGAGACCTTTACTCTCGACAGCGTTGGGGAATCGAAATTTTGAGGTTCTTGCTGATCCAAGGTTGCATAATAATTACAACTCCGAAGAGATGTTTCGGATGGCGTCTTGTGCTGCAAATTGTGTGCGCCACTCAGCAGATCATCGTCCTCGAATGAGCCAGGTAGTGGATGGTTTAGCAGGAAAGATTAGCGTGGATAATTGGAACGAGGAGAGCACAGAAGTGGACCCGAACAAGTTTTGGAAGGGGGCACTAGGCGGAGGCAGTAGCACTGGAGAATACAGTGAGCCTATCAGTTCATCAAGCCGCGAAAATACAACTGAAGGCTCTTCTTGA 1110 0.4477 MSPSLAAEEVAVSLLPSSITFDHSPGTFTYEELELATGGFSESNFLGQGGFGTVHKGVLPKNNQSVAIKQQRSGSKQGMQEFQTEVQVISRVHHRHLVSLVGYCTAESQRTLMLVYEFVPNKTLDFHLHGKDTDTLDWSTRMKIANGSAKGLAYLHEDCEPKIIHRDIKAANILIDNNFEPKIADFGLAKLSSDNDTHVTTARIKGTFGYLAPEYASSGRLTEKADVFSFGVVLLELITGRKPVLQTGSFTEDSLVEWARPLLSTALGNRNFEVLADPRLHNNYNSEEMFRMASCAANCVRHSADHRPRMSQVVDGLAGKISVDNWNEESTEVDPNKFWKGALGGGSSTGEYSEPISSSSRENTTEGSS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00036 369 MobiDBLite consensus disorder prediction 350 369 - -
Pral5144g00036 369 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 344 IPR047117 -
Pral5144g00036 369 ProSiteProfiles Protein kinase domain profile. 40 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00036 369 CDD STKc_IRAK 46 317 - -
Pral5144g00036 369 MobiDBLite consensus disorder prediction 336 369 - -
Pral5144g00036 369 Pfam Protein tyrosine and serine/threonine kinase 44 315 IPR001245 GO:0004672|GO:0006468
Pral5144g00036 369 Gene3D Transferase(Phosphotransferase) domain 1 119 337 - -
Pral5144g00036 369 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Pral5144g00036 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5144g00036 369 SMART serkin_6 40 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00036 369 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Pral5144g00036 369 Gene3D Phosphorylase Kinase; domain 1 26 118 - -
Pral5144g00036 369 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 15 118 - -
Pral5144g00036 369 FunFam proline-rich receptor-like protein kinase PERK8 119 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00036 Pral-Chr5144 401674 404751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00036 28 369 Trihelix Transcription Factor Family AT1G70460 56.742 2.62e-127 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00036 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00036 - - pcin:129289307 471.855