Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00035 ATGAGATTCCTTGCTCGCTGCTGCTTCGTAAAGACGGACTTGCACGAAGAAGCCACAACTCTTCGCAGGCGATGCATCCACCGTCTCTGGATACACCTCTCCCCTACTACAGACTCCAGGATTACCCAAACTCGCCGCCTGCGCCTGCGACTCCGCCTGATACAGGCTCCTCCAACTGGCCGCCTCCGTCTCCGTCTCCGTAAAGTTGAAGTAGTTTCAAGTCCAGTGTCACGAACTACTTCTGGCCTTGTATTAGGACCTCAAACGTTTACATATCAAGAATTAAAATTGGCAACAGATGGATTCTCAAGGTCAAATTTTCTGGGCGAAGGTGGTTTTGGCATTGTCCATAAAGGAGTCCACCCCAGTAAGAATAATAAAAGTGTTGCCATTAAGCAGCTTGAATCTACAATGGAAGAGGCAAAGAGGGATTTCCAGTCTGAGGCCGTGATCATTAGTCGAATCCATCGCAAACATCTTGTTTCACTTGCTGGATACTGCGTTGATGAAGTTCACAAAAAGGTGATGCTTGTTTATGAGTATGTCCCAAATAGAACCCTAGCGCACCACCTGCATGGAGAAGGCACAACACATGTAGACTGGGAAACAAGGATGAAAATTGCTGTTGGCTCTGCTCAAGGATTGAAATATCTGCATGAAGACTGTCATCCTCCAATCATACACCGTGACATCAAGGCGGACAACATTCTTCTTGATGATAATTTTGAGCCAAAGGTTGCAGATTTTGGACTCGCCAGATTGCCATTAGAGGCCTGTATCATGACTCGAGTAATGGGAACTAAGGGGTACATTGCTCCAGAATTTGCTATGAGCGGCAATTACTCTGAGAAGTCAGATATATTCTCCTTTGGCATTGTGCTTTTAGAGCTTATTACAGGACGACAACCTGTTAATGATCCTGAGAAGTACCAGCAAGGAAGTTTGTATGAGTGGGCGACGACGTTGTTGTCGGAAGCTTTGAGAAACAGAAACTTTGAGGAACTTGCTGATGCAAGGTTGCAGGGAAAGTACGACCCGGCAGAGATGTTTCGAATGGTTTCTTGTGCTGCTAATTGCGTTCGCCATTCAGCTGAGCGTCGTCCTCGAATGAGCGAGGTGGGTAAAGCTTTAGAAGGAGTGATTTCCCTGGATAATGATTTGACGGAGGACCCCGCCGCACTACATCAACGGGAAGCATACGCGGAGACGTTGAGAAGGATGGTAGCAGGAACAAGGAGCACGCCGGTCCCATCTGATCAATTTCGCCCCCTCGAGGATTAG 1281 0.4738 MRFLARCCFVKTDLHEEATTLRRRCIHRLWIHLSPTTDSRITQTRRLRLRLRLIQAPPTGRLRLRLRKVEVVSSPVSRTTSGLVLGPQTFTYQELKLATDGFSRSNFLGEGGFGIVHKGVHPSKNNKSVAIKQLESTMEEAKRDFQSEAVIISRIHRKHLVSLAGYCVDEVHKKVMLVYEYVPNRTLAHHLHGEGTTHVDWETRMKIAVGSAQGLKYLHEDCHPPIIHRDIKADNILLDDNFEPKVADFGLARLPLEACIMTRVMGTKGYIAPEFAMSGNYSEKSDIFSFGIVLLELITGRQPVNDPEKYQQGSLYEWATTLLSEALRNRNFEELADARLQGKYDPAEMFRMVSCAANCVRHSAERRPRMSEVGKALEGVISLDNDLTEDPAALHQREAYAETLRRMVAGTRSTPVPSDQFRPLED 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00035 426 FunFam proline-rich receptor-like protein kinase PERK8 182 391 - -
Pral5144g00035 426 CDD STKc_IRAK 108 379 - -
Pral5144g00035 426 SMART serkin_6 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00035 426 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 74 407 IPR047117 -
Pral5144g00035 426 ProSiteProfiles Protein kinase domain profile. 102 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00035 426 Coils Coil 124 144 - -
Pral5144g00035 426 ProSitePatterns Protein kinases ATP-binding region signature. 108 132 IPR017441 GO:0005524
Pral5144g00035 426 Gene3D Phosphorylase Kinase; domain 1 75 181 - -
Pral5144g00035 426 Pfam Protein tyrosine and serine/threonine kinase 106 375 IPR001245 GO:0004672|GO:0006468
Pral5144g00035 426 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 76 181 - -
Pral5144g00035 426 Gene3D Transferase(Phosphotransferase) domain 1 182 397 - -
Pral5144g00035 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Pral5144g00035 426 SUPERFAMILY Protein kinase-like (PK-like) 83 377 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00035 Pral-Chr5144 382605 389589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00035 77 378 Trihelix Transcription Factor Family AT5G38560 53.420 3.38e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00035 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00035 - - pcin:129289322 416.001