Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00034 ATGCATCCACCGTCTCTGGGTACACCTCTCCCCAGTTACAGAATCGACGATTACCAGCCAGAGGCCCCACCCCCCTGGGACAACTCGCCGCCTCCGCCGCCTTCACAGACAGAGTTGGGCCTTGCCCCAGATTTGGCCCCTGGCACTGGCACTGGCCCTGGCCCTGGCCCTGGCACTGGCCCTGGCCCTGGCCCTGCCCCTAACCTCGCCGCTCGCCCCACCTCTGCCCCTGTCGCTGCCTCCGCCCCCGGTCCTCCCGCTCCCCCCCCCCCCCCCGCCCCTGCCCCTGCCCCTCCCGCTCCCGCTGCCCCTGCCCCTGCCCCTCTGGCATCCCCCGGGTCTACGCCAATCTTGCTAATCGCAGGACTCTCTGTGCTTGGTTTGTTGCTGATACTGGGGTTATTATGTGCTGTTTTCTTTATCTGGAGAGCGAGAAGGAACAGAAGGACGAGAGGAAGAGACAACCCCTCTGCACAACCACACCAACCAGGAGCTTCACCACCTCCCACAGTCTTGGAATTCCCACATTTACCAAAAGAATTTAAAGATTATGAAGAATTACGCTCCGCAACAGGGGGATTCTCAGAGTCAAATATACTCGGCCAAGGTGGTTTTGGCACCGTCTATAAAGGAGTCCTCCCACCTAATAATAAAATTGTTGCAATTAAGAAGCTAAAGCCTGATGCCACACAAGGAAAGCCGGAGTTCCTCACTGAAGTTGAGACCATTAGCCGGGCCCATCACAGACATATTGTTTCCCTGGTGGGATACTACATCGGTCCAGACGAAGCTCATAAGGAGGTCATGATGCTTGTTTATGAGTACATCCCAAATAATTCACTAGACTCCCACCTGCATGGTGCAGGCACAGAAACTATAGACTGGCAAACAAGGATGAAGATTGCTATTGGCTCCGCAAAAGGATTGACATATCTTCATGAAGGCTGTAATCCCAAAATCATACACCGTGACATCAAATCAGCTAACATTCTTCTTCTTGATGATTTTCAGCCAAAGATAGCAGACTTTGGACTTGCAAAACCTTTATCAGACACTGTTACCCACCAGTCTTTGCAACAAGTGGCAGGAACCGTTGGATATTTAGCTCCAGAGTGTTTGGCTGGCGGGAAAATCAGTGAGAAGTCGGATGTCTTCGCTTTTGGTGTTGTGCTTTTGGAGTTGATTACGGGAGAAAAGCCTTGTCGACCTTTCGCAGATGGCGCCATCGTTAACTGGGCAAGACCTAAACTCTTCACAGCCTTGAACTCAAAAGATCGAAACTTTGAGGCTCTTGCTGATCCAAGGTTGCAGAATAAGTACAACTCTGAAGAGATGTTTCGGATGGTTTCTTGTGCTGCAAATTGCCTGCGCGATTCAGCCAATCTTCGTCCTCGAAGGAGCCAGGTAGTTGATGCTTTAGAAGAAAAGATTCCTCTGGATAATCGGGAGGAGGTGAGCCCACAAGGCCGCGGCGAACTCTTGCATATGCTTTGGAAAGTGATAAACGGAGTTGATGGCAGTTCCAGAGTGGGTGCATATTTTAACCGCTTTTTATCCCGGGAAACTTTAGTCGAACGATATCGATAG 1587 0.5148 MHPPSLGTPLPSYRIDDYQPEAPPPWDNSPPPPPSQTELGLAPDLAPGTGTGPGPGPGTGPGPGPAPNLAARPTSAPVAASAPGPPAPPPPPAPAPAPPAPAAPAPAPLASPGSTPILLIAGLSVLGLLLILGLLCAVFFIWRARRNRRTRGRDNPSAQPHQPGASPPPTVLEFPHLPKEFKDYEELRSATGGFSESNILGQGGFGTVYKGVLPPNNKIVAIKKLKPDATQGKPEFLTEVETISRAHHRHIVSLVGYYIGPDEAHKEVMMLVYEYIPNNSLDSHLHGAGTETIDWQTRMKIAIGSAKGLTYLHEGCNPKIIHRDIKSANILLLDDFQPKIADFGLAKPLSDTVTHQSLQQVAGTVGYLAPECLAGGKISEKSDVFAFGVVLLELITGEKPCRPFADGAIVNWARPKLFTALNSKDRNFEALADPRLQNKYNSEEMFRMVSCAANCLRDSANLRPRRSQVVDALEEKIPLDNREEVSPQGRGELLHMLWKVINGVDGSSRVGAYFNRFLSRETLVERYR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00034 528 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 170 275 - -
Pral5144g00034 528 MobiDBLite consensus disorder prediction 1 108 - -
Pral5144g00034 528 MobiDBLite consensus disorder prediction 149 175 - -
Pral5144g00034 528 Pfam Protein kinase domain 195 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00034 528 SUPERFAMILY Protein kinase-like (PK-like) 174 474 IPR011009 -
Pral5144g00034 528 ProSiteProfiles Protein kinase domain profile. 194 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00034 528 MobiDBLite consensus disorder prediction 23 38 - -
Pral5144g00034 528 MobiDBLite consensus disorder prediction 79 108 - -
Pral5144g00034 528 SMART serkin_6 194 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00034 528 MobiDBLite consensus disorder prediction 54 70 - -
Pral5144g00034 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Pral5144g00034 528 ProSitePatterns Protein kinases ATP-binding region signature. 200 224 IPR017441 GO:0005524
Pral5144g00034 528 Gene3D Transferase(Phosphotransferase) domain 1 276 487 - -
Pral5144g00034 528 CDD STKc_IRAK 200 475 - -
Pral5144g00034 528 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 134 482 IPR047117 -
Pral5144g00034 528 Gene3D Phosphorylase Kinase; domain 1 179 275 - -
Pral5144g00034 528 FunFam proline-rich receptor-like protein kinase PERK8 276 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00034 Pral-Chr5144 373380 380652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00034 87 476 Trihelix Transcription Factor Family AT1G70460 43.115 6.15e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00034 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00034 - - pcin:129289307 371.318